FIG4 (FIG4 phosphoinositide 5-phosphatase)

symbol:
FIG4
locus group:
protein-coding gene
location:
6q21
gene_family:
alias symbol:
SAC3|hSac3|dJ249I4.1|ALS11|CMT4J
alias name:
None
entrez id:
9896
ensembl gene id:
ENSG00000112367
ucsc gene id:
uc003ptt.3
refseq accession:
NM_014845
hgnc_id:
HGNC:16873
approved reserved:
2003-11-26
6q21
基因染色体位置图

FIG4基因编码一种磷酸肌醇磷酸酶,属于SAC(Suppressor of Actin)结构域磷酸酶家族,该家族成员通常参与调控细胞内膜运输和细胞骨架动态。FIG4蛋白的主要功能是通过水解磷脂酰肌醇-3,5-二磷酸(PI(3,5)P2)调控内体/溶酶体系统的膜动态平衡,这对神经元的轴突运输和髓鞘维持至关重要。其作用位点集中在晚期内体(late endosome)和溶酶体膜上,通过与膜蛋白复合物(如PIKfyve-ArPIKfyve复合物)相互作用来维持PI(3,5)P2的水平平衡。FIG4基因突变会导致其磷酸酶功能丧失,引发PI(3,5)P2代谢异常,进而造成溶酶体形态和功能缺陷。这类突变与多种神经系统疾病相关,例如遗传性痉挛性截瘫(SPG11)、Charcot-Marie-Tooth病4J型(CMT4J)和Yunis-Varon综合征,表现为运动神经元退化、周围神经病变或严重发育畸形。若FIG4过表达,可能通过过度消耗PI(3,5)P2破坏内体-溶酶体通路,导致自噬障碍;而表达降低时,PI(3,5)P2积累会诱发溶酶体空泡化,影响神经细胞的存活。FIG4所属的SAC家族磷酸酶均含有保守的SAC结构域(与细胞骨架肌动蛋白调节相关),其共性是通过去磷酸化特定脂质或蛋白质底物参与膜运输调控。目前"FIG4"的中文译名"肌醇多磷酸磷酸酶FIG4"(原英文:Inositol polyphosphate phosphatase FIG4)存在争议,部分文献直接使用FIG4或全称。

The protein encoded by this gene belongs to the SAC domain-containing protein gene family. The SAC domain, approximately 400 amino acids in length and consisting of seven conserved motifs, has been shown to possess phosphoinositide phosphatase activity. The yeast homolog, Sac1p, is involved in the regulation of various phosphoinositides, and affects diverse cellular functions such as actin cytoskeleton organization, Golgi function, and maintenance of vacuole morphology. Membrane-bound phosphoinositides function as signaling molecules and play a key role in vesicle trafficking in eukaryotic cells. Mutations in this gene have been associated with Charcot-Marie-Tooth disease, type 4J. [provided by RefSeq, Jul 2008]

由该基因编码的蛋白质属于SAC结构域的蛋白基因家族。在SAC结构域,在长度和组成的7个保守的基序大约400个氨基酸,已经显示出具有磷酸肌醇磷酸酶活性。酵母同源物,Sac1p,参与多种磷酸肌醇的调节,并影响多种细胞功能,如肌动蛋白细胞骨架组织,高尔基功能,和液泡形态维护。膜结合磷酸肌醇函数作为信号分子,并在真核细胞中发挥囊泡运输的关键作用。该基因突变与腓骨肌萎缩症,类型4J有关。 [由RefSeq的,2008年7月提供]

FIG4基因的碱基序列:[NCBI]
Loading Gene Browser...
FIG4基因的碱基突变:           仅显示部分snp
rs829810       rs865503       rs927127       rs927128       rs927129       rs4947012       rs7752232       rs11446875       rs12192268       rs12664830       rs55873083       rs61734833       rs73531421       rs73531425       rs75045314       rs75509752       rs75744276      

FIG4基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
CTGATGAAGCTAGGTATCTACG
57
AGTGGGACAAATCATAGCTG
57
AGTTAGAGGATCTGTGCCC
59
GCCTGATCCAATGTAATAGGT
58
GGGAAACCTCATCTCTGGG
60
CTAGGAACCCTTCATCATAGGG
60
GAGATACTTTCTAGTTGGGAGC
58
TGTTGAGTATAGACATGCCTG
58
AAAGATAGCACCATGGACC
57
AATCTTGTCTATCGGCATCTG
58
CTGATGAAGCTAGGTATCTACG
58
AGTGGGACAAATCATAGCTG
58
TCAGCACGTGACTTTATGC
59
AGAGTCATCCTCAGAGCTG
58
GATGCAGTTAGGTTATTTGAGG
57
AACAAGTTGAGAACCACCA
57
TGATGAAGCTAGGTATCTACGA
58
GAGTGGGACAAATCATAGCTG
59
GAGATACTTTCTAGTTGGGAGC
58
GTTGAGTATAGACATGCCTGTC
59
      尚未收录相关数据

FIG4基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

FIG4基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0016021
Q5TCS4 (UniProtKB)
IEA
GO:0042578
Q5TCS4 (UniProtKB)
IEA
GO:0016021
Q5TCS5 (UniProtKB)
IEA
GO:0042578
Q5TCS5 (UniProtKB)
IEA
GO:0000139
Q92562 (UniProtKB)
TAS
GO:0000139
Q92562 (UniProtKB)
TAS
GO:0004438
Q92562 (UniProtKB)
IEA
GO:0005515
Q92562 (UniProtKB)
IPI
GO:0005515
Q92562 (UniProtKB)
IPI
GO:0005783
Q92562 (UniProtKB)
IEA
GO:0006661
Q92562 (UniProtKB)
TAS
GO:0006661
Q92562 (UniProtKB)
TAS
GO:0006661
Q92562 (UniProtKB)
TAS
GO:0007033
Q92562 (UniProtKB)
IEA
GO:0007626
Q92562 (UniProtKB)
IEA
GO:0010008
Q92562 (UniProtKB)
IDA
GO:0010976
Q92562 (UniProtKB)
IEA
GO:0016311
Q92562 (UniProtKB)
IEA
GO:0031642
Q92562 (UniProtKB)
IEA
GO:0031901
Q92562 (UniProtKB)
TAS
GO:0031901
Q92562 (UniProtKB)
TAS
GO:0031902
Q92562 (UniProtKB)
TAS
GO:0031902
Q92562 (UniProtKB)
TAS
GO:0031902
Q92562 (UniProtKB)
TAS
GO:0032288
Q92562 (UniProtKB)
IEA
GO:0036092
Q92562 (UniProtKB)
IEA
GO:0043473
Q92562 (UniProtKB)
IEA
GO:0043812
Q92562 (UniProtKB)
IEA
GO:0043813
Q92562 (UniProtKB)
TAS
GO:0043813
Q92562 (UniProtKB)
TAS
GO:0048666
Q92562 (UniProtKB)
IEA
GO:0055037
Q92562 (UniProtKB)
IEA

可能调控 FIG4基因的相关microRNA:     

Reactome

MINT

BioGrid

mentha

String

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
CHARCOT-MARIE-TOOTH DISEASE, TYPE 4J 0.561628651 7 6 BeFree_CLINVAR_CTD_human_MGD_ORPHANET_UNIPROT
Yunis Varon syndrome 0.441085767 4 4 BeFree_CLINVAR_MGD_ORPHANET_UNIPROT
AMYOTROPHIC LATERAL SCLEROSIS 11 0.36 1 2 CLINVAR_CTD_human_UNIPROT
POLYMICROGYRIA, BILATERAL TEMPOROOCCIPITAL 0.24 1 0 ORPHANET_UNIPROT
Charcot-Marie-Tooth Disease 0.121900093 7 0 BeFree_CTD_human
Peripheral Neuropathy 0.120814326 4 0 BeFree_CTD_human
Amyotrophic Lateral Sclerosis 0.120271442 1 0 BeFree_ORPHANET
Polymicrogyria, Bilateral Occipital 0.12 0 1 CLINVAR
Primary Lateral Sclerosis, Adult, 1 0.12 0 0 ORPHANET
Neuropathy 0.001628651 6 0 BeFree

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