F11R (F11 receptor)

symbol:
F11R
locus group:
protein-coding gene
location:
1q23.3
gene_family:
CD molecules|V-set domain containing|Immunoglobulin-like domain containing
alias symbol:
PAM-1|JCAM|JAM-1|JAM-A|JAMA|CD321
alias name:
None
entrez id:
50848
ensembl gene id:
ENSG00000158769
ucsc gene id:
uc009wtt.4
refseq accession:
NM_016946
hgnc_id:
HGNC:14685
approved reserved:
2001-04-10
1q23.3
基因染色体位置图

F11R基因(也称为JAM-A或Junctional Adhesion Molecule A)编码一种名为连接黏附分子A的蛋白质,属于免疫球蛋白超家族成员。该蛋白主要表达于上皮细胞、内皮细胞和血小板的细胞连接处(紧密连接tight junction),参与细胞间黏附、维持屏障功能及免疫调节。其生物学功能包括促进细胞极性形成、调控白细胞跨内皮迁移(transendothelial migration)以及参与血小板聚集。F11R通过与其他JAM家族成员(如JAM-B、JAM-C)或整合素(如LFA-1)相互作用发挥作用。该基因突变可能导致紧密连接结构异常,与炎症性肠病(如克罗恩病)、动脉粥样硬化和肿瘤转移相关。过表达F11R会增强细胞间黏附,抑制肿瘤细胞侵袭,但可能促进慢性炎症;而表达降低会破坏上皮/内皮屏障功能,增加血管通透性和炎症细胞浸润。F11R属于JAM基因家族,该家族共性为具有免疫球蛋白样结构域、参与细胞连接和免疫细胞运输。在病毒感染(如呼肠孤病毒)中,F11R还可作为病毒受体。其表达受炎症因子(如TNF-α)调控,在伤口愈合过程中表达上调。

Tight junctions represent one mode of cell-to-cell adhesion in epithelial or endothelial cell sheets, forming continuous seals around cells and serving as a physical barrier to prevent solutes and water from passing freely through the paracellular space. The protein encoded by this immunoglobulin superfamily gene member is an important regulator of tight junction assembly in epithelia. In addition, the encoded protein can act as (1) a receptor for reovirus, (2) a ligand for the integrin LFA1, involved in leukocyte transmigration, and (3) a platelet receptor. Multiple 5' alternatively spliced variants, encoding the same protein, have been identified but their biological validity has not been established. [provided by RefSeq, Jul 2008]

紧密连接代表细胞 - 细胞粘附的一种模式中的上皮或内皮细胞片层,形成围绕细胞连续密封件和用作物理屏障,以防止溶质和水自由通过细胞旁空间。由该免疫球蛋白超家族基因构件所编码的蛋白是上皮紧密连接组件的重要调节器。此外,编码的蛋白质可以作为(1)呼肠孤病毒的受体,(2)的配体的整合LFA1,参与白细胞轮回,及(3)一个血小板受体。多个5‘可变剪接变体,编码相同的蛋白质,已经鉴定,但它们的生物有效性尚未建立。 [由RefSeq的,2008年7月提供]

F11R基因的碱基序列:[NCBI]
Loading Gene Browser...
F11R基因的碱基突变:           仅显示部分snp
rs836       rs993       rs11624       rs790055       rs790056       rs812741       rs869985       rs1044478       rs1062826       rs1062827       rs1127860       rs1127862       rs1127867       rs1127876       rs1127877       rs1806774       rs2039223      

F11R基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
CAAGATCACAGTGCCTCCA
60
TGTTCTGAGCATGTCAGCA
60
ACCTGAAGTCAGAATTCCTG
57
TCATAGGAAGGAGTACGGG
58
CTGAGAATAATCCTGTGAAGTTGTC
59
TCTCCTTGGTCAAACTTCCA
58
AAGTTGTCCTGTGCCTACTC
60
CGGTCCTCATAGGAAGCTG
60
AATAATTGTGCTCCCTGGC
58
GCACAGGACAACTTCACAG
59
GATCACAGCTTCCTATGAGG
58
TATGTCCCAGTGTCTTCCC
58
AGTGATGCCTACGAATCCC
59
ATCAAAGACCAGCTCTCCTG
59
TGATTCTCCTGGGAATCTTGG
60
AAGTCCCTTTCTTTGTTCTGTC
59
AGTTGTCCTGTGCCTACTC
59
CGGTCCTCATAGGAAGCTG
60
GTGATGCCTACGAATCCCA
59
GATCAAAGACCAGCTCTCCT
59
      尚未收录相关数据

F11R基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

F11R基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0016021
A0A087WY82 (UniProtKB)
IEA
GO:0001618
Q9Y624 (UniProtKB)
IEA
GO:0001817
Q9Y624 (UniProtKB)
IEA
GO:0005515
Q9Y624 (UniProtKB)
IPI
GO:0005515
Q9Y624 (UniProtKB)
IPI
GO:0005515
Q9Y624 (UniProtKB)
IPI
GO:0005515
Q9Y624 (UniProtKB)
IPI
GO:0005515
Q9Y624 (UniProtKB)
IPI
GO:0005515
Q9Y624 (UniProtKB)
IPI
GO:0005515
Q9Y624 (UniProtKB)
IPI
GO:0005515
Q9Y624 (UniProtKB)
IPI
GO:0005886
Q9Y624 (UniProtKB)
IDA
GO:0005886
Q9Y624 (UniProtKB)
TAS
GO:0005886
Q9Y624 (UniProtKB)
TAS
GO:0005886
Q9Y624 (UniProtKB)
TAS
GO:0005911
Q9Y624 (UniProtKB)
TAS
GO:0005923
Q9Y624 (UniProtKB)
IDA
GO:0006954
Q9Y624 (UniProtKB)
TAS
GO:0007155
Q9Y624 (UniProtKB)
IEA
GO:0007179
Q9Y624 (UniProtKB)
TAS
GO:0009314
Q9Y624 (UniProtKB)
IEA
GO:0015630
Q9Y624 (UniProtKB)
IDA
GO:0016021
Q9Y624 (UniProtKB)
IEA
GO:0030054
Q9Y624 (UniProtKB)
IDA
GO:0030054
Q9Y624 (UniProtKB)
TAS
GO:0030054
Q9Y624 (UniProtKB)
TAS
GO:0030054
Q9Y624 (UniProtKB)
TAS
GO:0030054
Q9Y624 (UniProtKB)
TAS
GO:0030054
Q9Y624 (UniProtKB)
TAS
GO:0030054
Q9Y624 (UniProtKB)
TAS
GO:0030165
Q9Y624 (UniProtKB)
IPI
GO:0030198
Q9Y624 (UniProtKB)
TAS
GO:0031032
Q9Y624 (UniProtKB)
IMP
GO:0031410
Q9Y624 (UniProtKB)
IEA
GO:0034260
Q9Y624 (UniProtKB)
IMP
GO:0036057
Q9Y624 (UniProtKB)
IEA
GO:0043547
Q9Y624 (UniProtKB)
IMP
GO:0045777
Q9Y624 (UniProtKB)
IEA
GO:0046718
Q9Y624 (UniProtKB)
IEA
GO:0050892
Q9Y624 (UniProtKB)
IMP
GO:0050900
Q9Y624 (UniProtKB)
TAS
GO:0070062
Q9Y624 (UniProtKB)
IDA
GO:0070062
Q9Y624 (UniProtKB)
IDA
GO:0070062
Q9Y624 (UniProtKB)
IDA
GO:0070062
Q9Y624 (UniProtKB)
IDA
GO:0070830
Q9Y624 (UniProtKB)
TAS
GO:0090002
Q9Y624 (UniProtKB)
IMP
GO:0090557
Q9Y624 (UniProtKB)
IGI
GO:0090557
Q9Y624 (UniProtKB)
IMP
GO:0090559
Q9Y624 (UniProtKB)
IMP
GO:2000249
Q9Y624 (UniProtKB)
IMP

可能调控 F11R基因的相关microRNA:     

Reactome

MINT

BioGrid

IntAct

mentha

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
Hypertensive disease 0.083810118 5 0 BeFree_LHGDN_RGD
Inflammation 0.08272435 2 0 LHGDN_RGD
Peptic Esophagitis 0.08 1 0 RGD
Diabetes Mellitus, Experimental 0.08 1 0 RGD
Prehypertension 0.08 1 0 RGD
Transient Ischemic Attack 0.08 1 0 RGD
Mammary Neoplasms 0.002995792 2 0 BeFree_LHGDN
Obesity 0.002367032 1 0 GAD
Malignant neoplasm of breast 0.001900093 7 0 BeFree
Breast Carcinoma 0.001900093 7 0 BeFree

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