ERCC6-PGBD3 (ERCC6-PGBD3 readthrough)

symbol:
ERCC6-PGBD3
locus group:
other
location:
10q11.23
gene_family:
alias symbol:
alias name:
entrez id:
101243544
ensembl gene id:
ENSG00000258838
ucsc gene id:
refseq accession:
NM_001277058
hgnc_id:
HGNC:48347
approved reserved:
2013-05-10T00:00:00Z
10q11.23
基因染色体位置图

None

This locus represents naturally-occurring readthrough transcription between the neighboring ERCC6 (excision repair cross-complementing rodent repair deficiency, complementation group 6) and PGBD (piggyBac transposable element derived 3) genes on chromosome 10. The readthrough transcripts encode a fusion protein that shares sequence with the product of each individual gene. The encoded protein may function in DNA repair and in the innate immune response. It binds to MER85 sequences in DNA, and may interact with transcription factors to modulate gene expression. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Feb 2013]

这一位点代表天然邻近ERCC6(切除修复交叉互补灭鼠修复缺陷,互补组6)和PGBD(piggyBac转座子衍生3)10号染色体的基因的转录通读编码融合之间通读转录蛋白与每个基因的产物共享序列。所编码的蛋白质可在DNA修复和先天免疫应答的作用。它结合到MER85序列的DNA,并且可以与转录因子相互作用,以调节基因表达。选择性剪接结果在多个抄本变形。 [由RefSeq的,2013年2月提供]

CCND1基因的碱基序列:[NCBI]
Loading Gene Browser...
ERCC6-PGBD3基因的碱基突变:           仅显示部分snp
rs1012553       rs1012554       rs1018603       rs1126112       rs1917801       rs1917802       rs1964145       rs2228524       rs2228528       rs2281792       rs2281793       rs2281794       rs3219688       rs3750745       rs3750746       rs3750747       rs3750748      

ERCC6-PGBD3基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
CGGTTAAGTCCCAAGATGC
59
CTTGCTTCTATGCTGTCATCTG
60
CGGTTAAGTCCCAAGATGC
59
TTGCTTCTATGCTGTCATCTG
59
CGGTTAAGTCCCAAGATGC
59
TGCTTCTATGCTGTCATCTG
58
      尚未收录相关数据

ERCC6-PGBD3基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

ERCC6-PGBD3基因的本体(GO)信息:

可能调控 ERCC6-PGBD3基因的相关microRNA:     

IntAct

mentha

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源

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