CPS1 (carbamoyl-phosphate synthase 1)

symbol:
CPS1
locus group:
protein-coding gene
location:
2q34
gene_family:
alias symbol:
GATD6
alias name:
carbamoyl-phosphate synthase (ammo…
entrez id:
1373
ensembl gene id:
ENSG00000021826
ucsc gene id:
uc002vee.5
refseq accession:
NM_001122633
hgnc_id:
HGNC:2323
approved reserved:
2001-06-22
2q34
基因染色体位置图

CPS1(Carbamoyl Phosphate Synthetase 1)是一种位于线粒体的关键代谢酶,主要参与尿素循环(urea cycle),负责将氨转化为尿素以排出体外,从而防止氨在体内积累导致毒性。CPS1在肝脏中高度表达,其功能是催化尿素循环的第一步反应,即利用氨、碳酸氢盐和ATP合成氨基甲酰磷酸(carbamoyl phosphate)。这一产物随后进入鸟氨酸循环,最终形成尿素。CPS1的活性依赖于N-乙酰谷氨酸(NAG)作为变构激活剂,NAG由N-乙酰谷氨酸合成酶(NAGS)产生,是调节尿素循环的重要分子。CPS1基因突变会导致CPS1缺乏症(CPS1 deficiency),这是一种罕见的常染色体隐性遗传病,表现为高氨血症(hyperammonemia),严重时可引发脑损伤、昏迷甚至死亡,尤其在新生儿期发病时更为危险。CPS1缺乏症的治疗包括限制蛋白质摄入、补充精氨酸及使用氨清除药物,严重时需肝移植。CPS1属于氨基甲酰磷酸合成酶(CPS)基因家族,该家族还包括CPS2(主要参与嘧啶合成)。CPS家族成员的共性是催化氨基甲酰磷酸的生成,但CPS1和CPS2的底物来源和生物学功能不同:CPS1依赖氨作为氮源并参与尿素循环,而CPS2利用谷氨酰胺并参与嘧啶核苷酸合成。CPS1的过表达在正常情况下较为罕见,但某些肝癌细胞中可能因代谢重编程而增加表达以支持增殖需求。相反,CPS1表达降低或功能丧失会直接损害尿素循环,导致氨代谢障碍。此外,CPS1的活性与肝功能密切相关,慢性肝病(如肝硬化)患者可能出现继发性尿素循环功能障碍。研究还发现CPS1基因多态性与心血管疾病风险相关,可能通过影响同型半胱氨酸代谢发挥作用。总体而言,CPS1是氨解毒的核心基因,其功能异常对机体影响显著,尤其在肝脏和神经系统。

The mitochondrial enzyme encoded by this gene catalyzes synthesis of carbamoyl phosphate from ammonia and bicarbonate. This reaction is the first committed step of the urea cycle, which is important in the removal of excess urea from cells. The encoded protein may also represent a core mitochondrial nucleoid protein. Three transcript variants encoding different isoforms have been found for this gene. The shortest isoform may not be localized to the mitochondrion. Mutations in this gene have been associated with carbamoyl phosphate synthetase deficiency, susceptibility to persistent pulmonary hypertension, and susceptibility to venoocclusive disease after bone marrow transplantation.[provided by RefSeq, May 2010]

由该基因编码的线粒体酶催化由氨和碳酸氢氨甲酰磷酸的合成。此反应是尿素循环,这是在从细胞中除去过量尿素的重要的第一个关键步骤。所编码的蛋白质也可以代表一个芯线粒体类核蛋白质。已发现该基因编码不同亚型三个抄本变形。最短的同种型可能不会定位于线粒体。在这种基因突变与氨甲酰磷酸合成酶缺陷,易患持续性肺动脉高压,和易感性相关骨髓移植后到静脉闭塞病。[通过的RefSeq,2010年5月提供]

CPS1基因的碱基序列:[NCBI]
Loading Gene Browser...
CPS1基因的碱基突变:           仅显示部分snp
rs2287599       rs3770683       rs3770684       rs10932345       rs56139073       rs62203720       rs73076005       rs73984651       rs73984652       rs75010142       rs79847672       rs111418661       rs112033125       rs112758705       rs113259035       rs113599189       rs114030723      

CPS1基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
GGTTTCAAGCTGTTTGCCA
60
TTCTGTCCTTCTTGAGACGG
60
GAAAGGCCTCAACAGTGAG
59
GAAATCTGCTTATCTGAGAACCC
59
TTACTCCTTTGGCCATCCA
59
GTAATAGCTTCTGGGTACCCT
59
CCAATAGACACTGAGTACCTG
58
GTAAGACTGATGTAATGGTGGT
58
GAGATGCTGATGACAATTGTG
58
AACAACTGAGTCACCTGTG
58
AAGTGTAGGAGAGGTCATGG
59
ATAGATGGGTGGCACATCC
59
ATGATGTCTTGGTGATTGAGTG
59
TGGCCACATCAATGAAGTC
58
CCAAGAGTTTAGGGCAATGG
59
GTGTCCACTCCATAAATTGC
57
TTACCTACAATGGTCAGGAGC
60
CAATGTGATATGGACCACAGC
60
TACCATCAGGAGGCATGTG
59
TCTTGTATAGAGGAACTGCCA
58
      尚未收录相关数据

CPS1基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

CPS1基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0000050
P31327 (UniProtKB)
IBA
GO:0000050
P31327 (UniProtKB)
NAS
GO:0000050
P31327 (UniProtKB)
TAS
GO:0004070
P31327 (UniProtKB)
IBA
GO:0004087
P31327 (UniProtKB)
EXP
GO:0004087
P31327 (UniProtKB)
IMP
GO:0004087
P31327 (UniProtKB)
IMP
GO:0004088
P31327 (UniProtKB)
IBA
GO:0004151
P31327 (UniProtKB)
IBA
GO:0004175
P31327 (UniProtKB)
IEA
GO:0005509
P31327 (UniProtKB)
IEA
GO:0005515
P31327 (UniProtKB)
IPI
GO:0005515
P31327 (UniProtKB)
IPI
GO:0005515
P31327 (UniProtKB)
IPI
GO:0005515
P31327 (UniProtKB)
IPI
GO:0005524
P31327 (UniProtKB)
IEA
GO:0005543
P31327 (UniProtKB)
IEA
GO:0005730
P31327 (UniProtKB)
IEA
GO:0005743
P31327 (UniProtKB)
IEA
GO:0005759
P31327 (UniProtKB)
TAS
GO:0005980
P31327 (UniProtKB)
IMP
GO:0006207
P31327 (UniProtKB)
IBA
GO:0006508
P31327 (UniProtKB)
IEA
GO:0006526
P31327 (UniProtKB)
IBA
GO:0006541
P31327 (UniProtKB)
IEA
GO:0007494
P31327 (UniProtKB)
IEA
GO:0009636
P31327 (UniProtKB)
IEA
GO:0010043
P31327 (UniProtKB)
IEA
GO:0014075
P31327 (UniProtKB)
IEA
GO:0016595
P31327 (UniProtKB)
IEA
GO:0019240
P31327 (UniProtKB)
NAS
GO:0019433
P31327 (UniProtKB)
IMP
GO:0032094
P31327 (UniProtKB)
IEA
GO:0032403
P31327 (UniProtKB)
IEA
GO:0032496
P31327 (UniProtKB)
IDA
GO:0042493
P31327 (UniProtKB)
IEA
GO:0042594
P31327 (UniProtKB)
IEA
GO:0042645
P31327 (UniProtKB)
IDA
GO:0043200
P31327 (UniProtKB)
IEA
GO:0043234
P31327 (UniProtKB)
IEA
GO:0044344
P31327 (UniProtKB)
IEA
GO:0045909
P31327 (UniProtKB)
IMP
GO:0046209
P31327 (UniProtKB)
IMP
GO:0050667
P31327 (UniProtKB)
IDA
GO:0055081
P31327 (UniProtKB)
IEA
GO:0060416
P31327 (UniProtKB)
IEA
GO:0070365
P31327 (UniProtKB)
IEA
GO:0070409
P31327 (UniProtKB)
IMP
GO:0071320
P31327 (UniProtKB)
IEA
GO:0071377
P31327 (UniProtKB)
IEA
GO:0071400
P31327 (UniProtKB)
IEA
GO:0071548
P31327 (UniProtKB)
IEA
GO:0072341
P31327 (UniProtKB)
IDA
GO:0004088
Q5R211 (UniProtKB)
IEA
GO:0006207
Q5R211 (UniProtKB)
IEA
GO:0006541
Q5R211 (UniProtKB)
IEA

可能调控 CPS1基因的相关microRNA:     

Reactome

MINT

BioGrid

IntAct

mentha

String

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
Carbamoyl-Phosphate Synthase I Deficiency Disease 0.561085767 12 9 BeFree_CLINVAR_CTD_human_MGD_ORPHANET_UNIPROT
Liver Cirrhosis, Experimental 0.2 2 0 CTD_human_RGD
Fibrinogen Adverse Event 0.122367032 2 3 GAD_GWASCAT
Hyperammonemia 0.122367032 3 0 CTD_human_GAD
Postherpetic neuralgia 0.120271442 1 1 BeFree_CLINVAR
Precancerous Conditions 0.12 1 0 CTD_human
Alveolar capillary dysplasia 0.12 0 0 CTD_human
Persistent Fetal Circulation Syndrome 0.12 1 0 CTD_human
VENOOCCLUSIVE DISEASE AFTER BONE MARROW TRANSPLANTATION, SUSCEPTIBILITY TO 0.12 0 1 CLINVAR
Chronic Kidney Diseases 0.12 1 1 GWASCAT

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