CLEC4C (C-type lectin domain family 4 member C)

symbol:
CLEC4C
locus group:
protein-coding gene
location:
12p13.31
gene_family:
CD molecules|C-type lectin domain family
alias symbol:
HECL|DLEC|BDCA2|CD303
alias name:
None
entrez id:
170482
ensembl gene id:
ENSG00000198178
ucsc gene id:
uc001qth.1
refseq accession:
NM_203503
hgnc_id:
HGNC:13258
approved reserved:
2000-12-21
12p13.31
基因染色体位置图

This gene encodes a member of the C-type lectin/C-type lectin-like domain (CTL/CTLD) superfamily. Members of this family share a common protein fold and have diverse functions, such as cell adhesion, cell-cell signalling, glycoprotein turnover, and roles in inflammation and immune response. The encoded type 2 transmembrane protein may play a role in dendritic cell function. Two transcript variants encoding distinct isoforms have been identified for this gene. [provided by RefSeq, Jul 2008]

该基因编码超家族的C-型凝集素/ C-型凝集素样结构域(CTL / CTLD)的成员。这家人共享一个共同的蛋白折叠,并有不同的功能,例如细胞粘附,细胞 - 细胞信号传导,糖蛋白周转和角色在炎症和免疫反应的成员。所编码的2型跨膜蛋白可能参与树突细胞功能的作用。编码不同的两种亚型变种成绩单已经确定了这个基因。 [由RefSeq的,2008年7月提供]

CCND1基因的碱基序列:[NCBI]
Loading Gene Browser...
CLEC4C基因的碱基突变:           仅显示部分snp
rs1894823       rs2110089       rs2889500       rs3764005       rs4883439       rs6488608       rs6488610       rs6488614       rs6488616       rs6488617       rs7134111       rs7134202       rs7134479       rs7134635       rs7137970       rs7295270       rs7296264      

CLEC4C基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
GCTGTCCAAGTTACGAGAG
58
AGCTCCAATCTTCTATGTCCT
58
TCCAGTTGAAGGTCTGGTC
59
AGCTCCAATCCACAGAACTC
60
GCTGTCCAAGTTACGAGAG
58
AGCTCCAATCTTCTATGTCCT
58
TCCAGTTGAAGGTCTGGTC
59
AAATTGTGAGGCACCACAG
59
TCCAGTTGAAGGTCTGGTC
59
AAATTGTGAGGCACCACAG
59
ATGCAATCTTGGACTAAGAGTC
58
GATGAAATCCTGTTCTTCCCTG
59
ATGCAATCTTGGACTAAGAGTC
58
GATGAAATCCTGTTCTTCCCTG
59
CAGTTGAAGGTCTGGTCCA
59
AAATTGTGAGGCACCACAG
59
AAGGACATAGAAGATTGGAGCT
59
GCATCCCAGTAGAAATAAAGTAGC
60
ATGCAATCTTGGACTAAGAGTC
58
GATGAAATCCTGTTCTTCCCT
58
转录因子
影响基因
影响类型
参考文献链接(PubMed)
TCF4
CLEC4C
Activation

CLEC4C基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

CLEC4C基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0016021
H0YGB2 (UniProtKB)
IEA
GO:0002223
Q8WTT0 (UniProtKB)
TAS
GO:0002250
Q8WTT0 (UniProtKB)
IEA
GO:0005886
Q8WTT0 (UniProtKB)
TAS
GO:0016021
Q8WTT0 (UniProtKB)
IEA
GO:0030246
Q8WTT0 (UniProtKB)
IEA
GO:0045087
Q8WTT0 (UniProtKB)
IEA

可能调控 CLEC4C基因的相关microRNA:     

BioGrid

mentha

String

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
Lupus Erythematosus, Systemic 0.00272435 1 0 LHGDN
Nasopharyngeal carcinoma 0.000271442 1 0 BeFree
Tuberculosis 0.000271442 1 0 BeFree
Nasal Polyps 0.000271442 1 0 BeFree
Blastic plasmacytoid dendritic cell neoplasm 0.000271442 1 0 BeFree

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