CLEC12A (C-type lectin domain family 12 member A)

symbol:
CLEC12A
locus group:
protein-coding gene
location:
12p13.31
gene_family:
C-type lectin domain family
alias symbol:
CLL-1|MICL|CD371|DCAL-2
alias name:
dendritic cell-associated lectin 2…
entrez id:
160364
ensembl gene id:
ENSG00000172322
ucsc gene id:
uc001qwq.3
refseq accession:
NM_138337
hgnc_id:
HGNC:31713
approved reserved:
2005-02-09
12p13.31
基因染色体位置图

This gene encodes a member of the C-type lectin/C-type lectin-like domain (CTL/CTLD) superfamily. Members of this family share a common protein fold and have diverse functions, such as cell adhesion, cell-cell signaling, glycoprotein turnover, and roles in inflammation and immune response. The protein encoded by this gene is a negative regulator of granulocyte and monocyte function. Several alternatively spliced transcript variants of this gene have been described, but the full-length nature of some of these variants has not been determined. This gene is closely linked to other CTL/CTLD superfamily members in the natural killer gene complex region on chromosome 12p13. [provided by RefSeq, May 2011]

该基因编码超家族的C-型凝集素/ C-型凝集素样结构域(CTL / CTLD)的成员。这家人共享一个共同的蛋白折叠,并有不同的功能,例如细胞粘附,细胞 - 细胞信号传导,糖蛋白周转和角色在炎症和免疫反应的成员。由该基因编码的蛋白质是粒细胞和单核细胞功能的负调节剂。这个基因的几种可变剪接转录物变体已有描述,但其中的一些变体的全长性质尚未确定。该基因是密切相关的其他CTL / CTLD家族成员在自然杀伤基因复合体区域的12p13染色体。 [由RefSeq的,2011年5月提供]

CCND1基因的碱基序列:[NCBI]
Loading Gene Browser...
CLEC12A基因的碱基突变:           仅显示部分snp
rs15635       rs471463       rs471521       rs473289       rs476564       rs476844       rs477658       rs477751       rs478829       rs479499       rs479624       rs479809       rs483499       rs483576       rs486134       rs505594       rs519291      

CLEC12A基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
ATCTCCTGAAGAAGATTCCACTC
60
GGTGCGTTTCTTATAACCCAG
59
TCTTGGCAAGCATGTTTCAC
60
TTCTCTGGAGCTCTTCACTG
59
ATCTCCTGAAGAAGATTCCACTC
60
GGTGCGTTTCTTATAACCCAG
59
TCTTGGCAAGCATGTTTCAC
60
TTCTCTGGAGCTCTTCACTG
59
CAAGATCAGGAACCTCTCCA
58
CATTTGTGCTCTTGTTCTTTGC
59
CAAGATCAGGAACCTCTCCA
59
CATTTGTGCTCTTGTTCTTTGC
60
ATCTCCTGAAGAAGATTCCACTC
60
GGTGCGTTTCTTATAACCCAG
59
ATCTCCTGAAGAAGATTCCACTC
60
GGTGCGTTTCTTATAACCCAG
59
AAGATCAGGAACCTCTCCAC
58
CATTTGTGCTCTTGTTCTTTGC
59
GGATTATCTCCTGAAGAAGATTCC
59
GTTTCTTATAACCCAGGCAGAG
59
      尚未收录相关数据

CLEC12A基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

CLEC12A基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0016021
A8MVL9 (UniProtKB)
IEA
GO:0005886
Q5QGZ9 (UniProtKB)
IEA
GO:0016021
Q5QGZ9 (UniProtKB)
IEA
GO:0030246
Q5QGZ9 (UniProtKB)
IEA

可能调控 CLEC12A基因的相关microRNA:     

BioGrid

mentha

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
Rheumatoid Arthritis 0.120271442 2 0 BeFree_CTD_human
Leukemia, Myelocytic, Acute 0.00272435 1 0 LHGDN
Inflammation 0.00272435 1 0 LHGDN
Chronic Lymphocytic Leukemia 0.000542884 2 0 BeFree
Lymphoma 0.000271442 1 0 BeFree
Monoclonal Gammopathy of Undetermined Significance 0.000271442 1 1 BeFree
Neoplasm, Residual 0.000271442 1 0 BeFree
MULTICYSTIC RENAL DYSPLASIA, BILATERAL 0.000271442 1 0 BeFree
Splenic Marginal Zone B-Cell Lymphoma 0.000271442 1 1 BeFree
Waldenstrom Macroglobulinemia 0.000271442 1 1 BeFree

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