CLDN16 (claudin 16)

symbol:
CLDN16
locus group:
protein-coding gene
location:
3q28
gene_family:
Claudins
alias symbol:
PCLN1|HOMG3
alias name:
paracellin-1|hypomagnesemia 3, wit…
entrez id:
10686
ensembl gene id:
ENSG00000113946
ucsc gene id:
uc003fsi.3
refseq accession:
NM_006580
hgnc_id:
HGNC:2037
approved reserved:
2000-01-07
3q28
基因染色体位置图

CLDN16(Claudin-16)是紧密连接蛋白家族(Claudin家族)的重要成员,主要参与细胞间紧密连接的形成和功能调控。该基因编码的Claudin-16蛋白是一种跨膜蛋白,在肾脏的亨利氏袢升支粗段(TAL)上皮细胞中高度表达,负责调控镁离子和钙离子的重吸收。Claudin-16通过形成选择性离子通道,促进二价阳离子的旁细胞转运,对维持体内电解质平衡至关重要。若CLDN16发生功能丧失突变,会导致家族性低镁血症伴高钙尿症和肾钙质沉着症(FHHNC),表现为严重的低镁血症、高钙尿症和进行性肾功能衰竭。CLDN16的突变通常影响其蛋白的稳定性或定位,导致紧密连接功能受损,离子转运异常。Claudin家族由27个成员组成,其共性是形成紧密连接的主要结构成分,调控细胞旁通透性和维持组织屏障功能。若CLDN16过表达,可能增强肾脏对镁离子的重吸收,但具体生理影响尚不明确;而降低表达或功能缺失则直接导致镁离子流失和电解质紊乱。此外,CLDN16的表达异常还可能影响其他紧密连接蛋白(如CLDN19)的功能,进一步加剧离子转运障碍。研究还发现CLDN16与某些肾结石和慢性肾病相关,提示其在肾脏疾病中的潜在作用。该基因的深入研究有助于开发针对电解质紊乱和肾小管疾病的治疗策略。

Tight junctions represent one mode of cell-to-cell adhesion in epithelial or endothelial cell sheets, forming continuous seals around cells and serving as a physical barrier to prevent solutes and water from passing freely through the paracellular space. These junctions are comprised of sets of continuous networking strands in the outwardly facing cytoplasmic leaflet, with complementary grooves in the inwardly facing extracytoplasmic leaflet. The protein encoded by this gene, a member of the claudin family, is an integral membrane protein and a component of tight junction strands. It is found primarily in the kidneys, specifically in the thick ascending limb of Henle, where it acts as either an intercellular pore or ion concentration sensor to regulate the paracellular resorption of magnesium ions. Defects in this gene are a cause of primary hypomagnesemia, which is characterized by massive renal magnesium wasting with hypomagnesemia and hypercalciuria, resulting in nephrocalcinosis and renal failure. This gene and the CLDN1 gene are clustered on chromosome 3q28. [provided by RefSeq, Jun 2010]

紧密连接表示在上皮或内皮细胞片的细胞 - 细胞粘附的一种模式中,周围形成细胞连续密封件和用作物理屏障,以防止溶质和水自由通过细胞旁空间。这些结被在朝外细胞质小叶由集连续联网股,并在面向内的细胞质外小叶互补凹槽。由该基因编码的蛋白质中,紧密连接蛋白家族的一个成员,是一种完整的膜蛋白和紧密连接链的一个组成部分。它主要在肾脏中发现,特别是在亨勒,在那里它充当任一细胞间的孔或离子浓度传感器以调节镁离子的细胞旁吸收的厚上边缘。在这个基因的缺陷是伯镁血症,其特征是大量的肾镁消耗与低镁血症和高钙尿症,导致肾钙质沉着和肾功能衰竭的一个原因。这种基因和基因CLDN1聚集在3q28染色体。 [由RefSeq的,2010年6月提供]

CLDN16基因的碱基序列:[NCBI]
Loading Gene Browser...
CLDN16基因的碱基突变:           仅显示部分snp
rs1425114       rs1425115       rs1425116       rs1425117       rs1491991       rs1491992       rs1491993       rs1491994       rs1559651       rs1946326       rs2049673       rs2288234       rs2293532       rs2378569       rs3063121       rs3214506       rs3774004      

CLDN16基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
GGTTGGATCTAACACATACAGC
59
TTACCACCAGCTTCAAGGG
60
TGTGATCATGACTGAACTCG
58
ACATGCTGTATGTGTTAGATCC
58
TACATCGCTTGCTTCTTTGC
60
TCAGGTCCAACATCTCCAG
59
ACGTTACTAATAGCAGGTACC
57
AACCAAAGTAGAACGTTCCA
57
TTGTGATCATGACTGAACTCG
59
CATGCTGTATGTGTTAGATCCA
58
TACATCGCTTGCTTCTTTGC
60
CAGGTCCAACATCTCCAGAG
60
CGTTACTAATAGCAGGTACCC
58
AACCAAAGTAGAACGTTCCA
57
GGATCTAACACATACAGCATGTG
60
TTACCACCAGCTTCAAGGG
60
CGTTACTAATAGCAGGTACCC
58
ACCAAAGTAGAACGTTCCAC
58
GGAATGCGTCACAAATGCT
60
TTACCACCAGCTTCAAGGG
60
      尚未收录相关数据

CLDN16基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

CLDN16基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0005198
A0SDD8 (UniProtKB)
IEA
GO:0005923
A0SDD8 (UniProtKB)
IEA
GO:0016021
A0SDD8 (UniProtKB)
IEA
GO:0005198
Q9Y5I7 (UniProtKB)
IEA
GO:0005515
Q9Y5I7 (UniProtKB)
IPI
GO:0005886
Q9Y5I7 (UniProtKB)
IEA
GO:0005923
Q9Y5I7 (UniProtKB)
ISS
GO:0006811
Q9Y5I7 (UniProtKB)
IEA
GO:0006875
Q9Y5I7 (UniProtKB)
TAS
GO:0007588
Q9Y5I7 (UniProtKB)
TAS
GO:0015095
Q9Y5I7 (UniProtKB)
TAS
GO:0016021
Q9Y5I7 (UniProtKB)
IEA
GO:0016338
Q9Y5I7 (UniProtKB)
ISS
GO:0042802
Q9Y5I7 (UniProtKB)
ISS
GO:0051928
Q9Y5I7 (UniProtKB)
IEA
GO:0070633
Q9Y5I7 (UniProtKB)
IEA
GO:1903830
Q9Y5I7 (UniProtKB)
IEA

可能调控 CLDN16基因的相关microRNA:     

MINT

BioGrid

mentha

String

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
Primary hypomagnesemia (disorder) 0.56 3 15 CLINVAR_CTD_human_MGD_ORPHANET_UNIPROT
HYPERCALCIURIA, CHILDHOOD, SELF-LIMITING 0.12 0 1 CLINVAR
Renal Tubular Transport, Inborn Errors 0.08 1 0 RGD
Hypertensive disease 0.08 1 0 RGD
Hypercalciuria 0.007338862 18 0 BeFree_LHGDN
Nephrocalcinosis 0.007338862 18 0 BeFree_LHGDN
Neoplasm Metastasis 0.003267234 2 0 BeFree_LHGDN
Renal Insufficiency 0.003267234 2 0 BeFree_LHGDN
Kidney Failure 0.001357209 5 0 BeFree
Malignant neoplasm of breast 0.000814326 3 0 BeFree

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