CD209 (CD209 molecule)

symbol:
CD209
locus group:
protein-coding gene
location:
19p13.2
gene_family:
CD molecules|C-type lectin domain family
alias symbol:
DC-SIGN|hDC-SIGN|CDSIGN|DC-SIGN1|CLEC4L
alias name:
None
entrez id:
30835
ensembl gene id:
ENSG00000090659
ucsc gene id:
uc002mht.3
refseq accession:
NM_021155
hgnc_id:
HGNC:1641
approved reserved:
2000-07-19
19p13.2
基因染色体位置图

CD209(也称为DC-SIGN,全称Dendritic Cell-Specific Intercellular adhesion molecule-3-Grabbing Non-integrin)是一种主要表达于树突状细胞(Dendritic Cells, DCs)和巨噬细胞表面的C型凝集素受体(C-type lectin receptor),属于CLEC4(C-type lectin domain family 4)基因家族。该家族成员通常含有碳水化合物识别结构域(CRD),能够识别病原体表面的糖基化模式(如病毒、细菌或真菌的糖蛋白),参与先天免疫应答。CD209的生物学功能包括介导病原体识别(如HIV、埃博拉病毒、结核分枝杆菌等)、促进免疫细胞间黏附(如与T细胞表面的ICAM-3结合)以及调节炎症反应。其作用位点主要在细胞膜表面,通过内化病原体或传递信号激活下游免疫通路。突变可能导致CD209功能异常,例如某些单核苷酸多态性(SNPs)与HIV感染易感性或结核病风险相关。若CD209过表达,可能增强病原体捕获能力但同时也可能被某些病毒(如HIV)劫持以促进感染;而低表达则可能削弱免疫监视功能。该基因与传染病(如艾滋病、结核)、自身免疫病(如类风湿关节炎)和癌症(如肿瘤免疫逃逸)有关联。CLEC4家族共性为通过糖识别参与免疫防御,部分成员还具有抗原提呈或细胞迁移调控功能。专业术语解释:树突状细胞是专职抗原提呈细胞,负责启动适应性免疫;C型凝集素是一类依赖钙离子的糖结合蛋白;单核苷酸多态性指DNA序列中单个碱基的变异。

This gene encodes a transmembrane receptor and is often referred to as DC-SIGN because of its expression on the surface of dendritic cells and macrophages. The encoded protein is involved in the innate immune system and recognizes numerous evolutionarily divergent pathogens ranging from parasites to viruses with a large impact on public health. The protein is organized into three distinct domains: an N-terminal transmembrane domain, a tandem-repeat neck domain and C-type lectin carbohydrate recognition domain. The extracellular region consisting of the C-type lectin and neck domains has a dual function as a pathogen recognition receptor and a cell adhesion receptor by binding carbohydrate ligands on the surface of microbes and endogenous cells. The neck region is important for homo-oligomerization which allows the receptor to bind multivalent ligands with high avidity. Variations in the number of 23 amino acid repeats in the neck domain of this protein are rare but have a significant impact on ligand binding ability. This gene is closely related in terms of both sequence and function to a neighboring gene (GeneID 10332; often referred to as L-SIGN). DC-SIGN and L-SIGN differ in their ligand-binding properties and distribution. Alternative splicing results in multiple variants.[provided by RefSeq, Feb 2009]

这个基因编码的跨膜受体,并且通常被称为DC-SIGN,因为它的树突状细胞和巨噬细胞的表面上表达的。所编码的蛋白质是参与先天免疫系统,并认识许多进化分歧病原体从寄生虫对公众健康有很大的影响的病毒。该蛋白质被分为三个不同的结构域:N-末端跨膜结构域,串联重复颈域和C型凝集素的碳水化合物识别结构域。由C型凝集素和颈结构域的胞外区具有双重功能作为病原体识别受体和由微生物和内源性细胞的表面上的结合糖的配体的细胞粘附受体。颈部区域为同型寡聚允许受体结合的多价配体以高亲合力重要。在此蛋白质的颈部域23氨基酸重复数变化是罕见的,但对配体结合的能力的显著影响。该基因是在这两个序列和功能到相邻基因的术语(;通常被称为L-SIGN GeneID 10332)密切相关的。 DC-SIGN和L-SIGN在其配体结合特性和分布不同。选择性剪接产生多个变种。[由RefSeq的,2009年2月提供]

CD209基因的碱基序列:[NCBI]
Loading Gene Browser...
CD209基因的碱基突变:           仅显示部分snp
rs735239       rs735240       rs1544766       rs1544767       rs2287886       rs4804800       rs4804801       rs4804802       rs4804803       rs4804804       rs6603119       rs7248637       rs7248772       rs7252229       rs7359874       rs8101949       rs8105483      

CD209基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
TGCAACTCCTCTCCTTCAC
59
GTGAAGCGGTTACTTCTGG
59
TACAAGAGCTTAGCAGTGTC
57
GTCAGGTTCTGGTAGATCG
57
AGGAGCAGAACTTCCTACAG
59
CCTTCCTGATTTAGATCTGAAAGTC
59
TTAAAGCTGCAGTGGAACG
59
TTTGATTACGACGAGCTGG
58
TCATGTCTAACTCCCAGCG
59
CTTCTGGAAGACTGCTCCTC
60
TACAAGAGCTTAGCAGTGTC
57
GTCAGGTTCTGGTAGATCG
57
AGGAGCAGAACTTCCTACAG
59
CCTTCCTGATTTAGATCTGAAAGTC
59
TTGTCCAAGTGTCCAAGGT
59
TAAGCTGGGTCAGGTTCTG
59
GACTTTCAGATCTAAATCAGGAAGG
59
TTCCAATACTGCTTGAAGCTG
59
TACAAGAGCTTAGCAGTGTC
57
GTCAGGTTCTGGTAGATCG
57
      尚未收录相关数据

CD209基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

CD209基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0001618
Q9NNX6 (UniProtKB)
IEA
GO:0002223
Q9NNX6 (UniProtKB)
TAS
GO:0002250
Q9NNX6 (UniProtKB)
IEA
GO:0005515
Q9NNX6 (UniProtKB)
IPI
GO:0005515
Q9NNX6 (UniProtKB)
IPI
GO:0005515
Q9NNX6 (UniProtKB)
IPI
GO:0005537
Q9NNX6 (UniProtKB)
TAS
GO:0005737
Q9NNX6 (UniProtKB)
NAS
GO:0005886
Q9NNX6 (UniProtKB)
TAS
GO:0005886
Q9NNX6 (UniProtKB)
TAS
GO:0005886
Q9NNX6 (UniProtKB)
TAS
GO:0006897
Q9NNX6 (UniProtKB)
IEA
GO:0007157
Q9NNX6 (UniProtKB)
TAS
GO:0007159
Q9NNX6 (UniProtKB)
NAS
GO:0009986
Q9NNX6 (UniProtKB)
IDA
GO:0009988
Q9NNX6 (UniProtKB)
TAS
GO:0016020
Q9NNX6 (UniProtKB)
TAS
GO:0016021
Q9NNX6 (UniProtKB)
IEA
GO:0019048
Q9NNX6 (UniProtKB)
TAS
GO:0019062
Q9NNX6 (UniProtKB)
TAS
GO:0019079
Q9NNX6 (UniProtKB)
NAS
GO:0019882
Q9NNX6 (UniProtKB)
NAS
GO:0030246
Q9NNX6 (UniProtKB)
NAS
GO:0035556
Q9NNX6 (UniProtKB)
NAS
GO:0042129
Q9NNX6 (UniProtKB)
IDA
GO:0042605
Q9NNX6 (UniProtKB)
NAS
GO:0045087
Q9NNX6 (UniProtKB)
IEA
GO:0046718
Q9NNX6 (UniProtKB)
IEA
GO:0046790
Q9NNX6 (UniProtKB)
TAS
GO:0046872
Q9NNX6 (UniProtKB)
IEA
GO:0046968
Q9NNX6 (UniProtKB)
NAS
GO:0070062
Q9NNX6 (UniProtKB)
IDA
GO:0075733
Q9NNX6 (UniProtKB)
TAS

可能调控 CD209基因的相关microRNA:     

BioGrid

IntAct

mentha

String

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
MYCOBACTERIUM TUBERCULOSIS, SUSCEPTIBILITY TO (finding) 0.24 0 0 CLINVAR_CTD_human
HIV Infections 0.147470506 19 1 BeFree_CTD_human_GAD
Tuberculosis, Pulmonary 0.126448592 7 2 BeFree_CTD_human_GAD_LHGDN
Dengue Fever 0.122985861 11 2 BeFree_CTD_human
DENGUE FEVER, PROTECTION AGAINST 0.12 0 0 CLINVAR
HUMAN IMMUNODEFICIENCY VIRUS TYPE 1, SUSCEPTIBILITY TO 0.12 0 0 CLINVAR
Tuberculosis 0.023894273 16 1 BeFree_GAD_LHGDN
Infection 0.016346101 6 0 LHGDN
Severe Acute Respiratory Syndrome 0.010096888 4 0 BeFree_GAD_LHGDN
Hepatitis C 0.005634266 4 1 BeFree_GAD_LHGDN

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