CCL5 (C-C motif chemokine ligand 5)

symbol:
CCL5
locus group:
protein-coding gene
location:
17q12
gene_family:
Chemokine ligands|Endogenous ligands
alias symbol:
RANTES|SISd|TCP228|MGC17164
alias name:
T-cell specific protein p288|T-cel…
entrez id:
6352
ensembl gene id:
ENSG00000271503
ucsc gene id:
uc060eeh.1
refseq accession:
NM_002985
hgnc_id:
HGNC:10632
approved reserved:
1990-07-05
17q12
基因染色体位置图

CCL5(也称为RANTES,Regulated upon Activation, Normal T-cell Expressed and Secreted)是一种趋化因子(chemokine),属于CC趋化因子家族(CC chemokine family),该家族成员的特征是前两个半胱氨酸(cysteine)残基相邻(CC motif)。CCL5主要由T细胞、巨噬细胞、内皮细胞和血小板等分泌,其生物学功能主要是通过结合受体(如CCR1、CCR3、CCR5)招募免疫细胞(如T细胞、单核细胞、嗜酸性粒细胞等)到炎症或感染部位,参与免疫调节和炎症反应。CCL5在病毒感染(如HIV)、过敏性疾病、自身免疫病(如类风湿关节炎)和癌症中发挥重要作用。CCL5的突变或表达异常可能影响其与受体的结合能力,导致免疫细胞迁移障碍,从而影响机体的抗感染或炎症反应。例如,某些CCL5基因多态性(genetic polymorphisms)与HIV感染易感性或疾病进展相关。CCL5过表达可能加剧炎症性疾病(如哮喘)或促进肿瘤微环境中免疫抑制性细胞的聚集,而降低表达则可能削弱抗病毒免疫反应。CCL5还参与组织修复和血管生成,其异常表达可能与动脉粥样硬化或肿瘤血管生成有关。CC趋化因子家族的共性是通过CC motif结合G蛋白偶联受体(GPCRs),调控免疫细胞的迁移和活化。

This gene is one of several chemokine genes clustered on the q-arm of chromosome 17. Chemokines form a superfamily of secreted proteins involved in immunoregulatory and inflammatory processes. The superfamily is divided into four subfamilies based on the arrangement of the N-terminal cysteine residues of the mature peptide. This chemokine, a member of the CC subfamily, functions as a chemoattractant for blood monocytes, memory T helper cells and eosinophils. It causes the release of histamine from basophils and activates eosinophils. This cytokine is one of the major HIV-suppressive factors produced by CD8+ cells. It functions as one of the natural ligands for the chemokine receptor chemokine (C-C motif) receptor 5 (CCR5), and it suppresses in vitro replication of the R5 strains of HIV-1, which use CCR5 as a coreceptor. Alternative splicing results in multiple transcript variants that encode different isoforms. [provided by RefSeq, Jul 2013]

该基因是聚集在17号染色??体的q臂上趋化因子构成涉及免疫调节和炎症过程的分泌蛋白的超家族几个趋化因子的基因之一。该超家族分为基于成熟的肽的N末端半胱氨酸残基的排列四个亚科。该趋化因子,所述CC亚家族的一个成员,用作用于血单核细胞,记忆性T辅助细胞和嗜酸性粒细胞趋化物。它会导致由嗜碱细胞的组胺释放并激活嗜酸性粒细胞。这种细胞因子是由CD8 +细胞产生的主要的HIV-抑制因素之一。它的功能作为天然配体的趋化因子受体趋化因子(C-C基序)受体5(CCR5)之一,它HIV-1的R5的菌株,它使用CCR5作为辅助受体的体外复制抑制。选择性剪接结果在多个抄本变形编码不同的亚型。 [由RefSeq的,2013年7月提供]

CCND1基因的碱基序列:[NCBI]
Loading Gene Browser...
CCL5基因的碱基突变:           仅显示部分snp
rs1065341       rs1065341       rs1800825       rs1800825       rs2107538       rs2107538       rs2280788       rs2280788       rs2280789       rs2280789       rs3817655       rs3817655       rs3817656       rs3817656       rs4239253       rs4239253       rs4796120      

CCL5基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
AACAAGGGCAAGCTTTGTC
59
AAAGAGTTGATGTACTCCCGA
59
CCATATTCCTCGGACACCA
59
GTGACAAAGACGACTGCTG
59
ATATTCCTCGGACACCACAC
60
GTGACAAAGACGACTGCTG
59
AACAAGGGCAAGCTTTGTC
59
AGTTGATGTACTCCCGAACC
60
TATTCCTCGGACACCACAC
59
GTGACAAAGACGACTGCTG
59
AACAAGGGCAAGCTTTGTC
59
TTGATGTACTCCCGAACCC
59
转录因子
影响基因
影响类型
参考文献链接(PubMed)
ATF3
CCL5
Unknown
CREB1
CCL5
Unknown
IRF1
CCL5
Unknown
IRF3
CCL5
Unknown
IRF7
CCL5
Unknown
JUN
CCL5
Unknown
JUND
CCL5
Unknown
KLF13
CCL5
Unknown
NFKB1
CCL5
Activation
NFKB1
CCL5
Unknown

CCL5基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

CCL5基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0005615
A0A075B7C5 (UniProtKB)
IEA
GO:0006954
A0A075B7C5 (UniProtKB)
IEA
GO:0006955
A0A075B7C5 (UniProtKB)
IEA
GO:0008009
A0A075B7C5 (UniProtKB)
IEA
GO:0009615
A0A075B7C5 (UniProtKB)
IEA
GO:0031726
A0A075B7C5 (UniProtKB)
IEA
GO:0031729
A0A075B7C5 (UniProtKB)
IEA
GO:0031730
A0A075B7C5 (UniProtKB)
IEA
GO:0060326
A0A075B7C5 (UniProtKB)
IEA
GO:0070098
A0A075B7C5 (UniProtKB)
IEA
GO:0005615
D0EI67 (UniProtKB)
IEA
GO:0006954
D0EI67 (UniProtKB)
IEA
GO:0006955
D0EI67 (UniProtKB)
IEA
GO:0008009
D0EI67 (UniProtKB)
IEA
GO:0009615
D0EI67 (UniProtKB)
IEA
GO:0031726
D0EI67 (UniProtKB)
IEA
GO:0031729
D0EI67 (UniProtKB)
IEA
GO:0031730
D0EI67 (UniProtKB)
IEA
GO:0060326
D0EI67 (UniProtKB)
IEA
GO:0070098
D0EI67 (UniProtKB)
IEA
GO:0000165
P13501 (UniProtKB)
IMP
GO:0002407
P13501 (UniProtKB)
TAS
GO:0002544
P13501 (UniProtKB)
IEA
GO:0002548
P13501 (UniProtKB)
IC
GO:0002676
P13501 (UniProtKB)
TAS
GO:0004435
P13501 (UniProtKB)
IDA
GO:0004672
P13501 (UniProtKB)
IDA
GO:0005515
P13501 (UniProtKB)
IPI
GO:0005515
P13501 (UniProtKB)
IPI
GO:0005576
P13501 (UniProtKB)
TAS
GO:0005576
P13501 (UniProtKB)
TAS
GO:0005576
P13501 (UniProtKB)
TAS
GO:0005576
P13501 (UniProtKB)
TAS
GO:0005576
P13501 (UniProtKB)
TAS
GO:0005615
P13501 (UniProtKB)
IBA
GO:0005737
P13501 (UniProtKB)
IEA
GO:0006816
P13501 (UniProtKB)
IDA
GO:0006874
P13501 (UniProtKB)
IDA
GO:0006887
P13501 (UniProtKB)
IDA
GO:0006935
P13501 (UniProtKB)
NAS
GO:0006954
P13501 (UniProtKB)
IDA
GO:0007159
P13501 (UniProtKB)
IDA
GO:0007186
P13501 (UniProtKB)
IDA
GO:0007186
P13501 (UniProtKB)
IDA
GO:0007267
P13501 (UniProtKB)
IDA
GO:0007568
P13501 (UniProtKB)
IEA
GO:0008009
P13501 (UniProtKB)
IDA
GO:0008009
P13501 (UniProtKB)
NAS
GO:0008201
P13501 (UniProtKB)
IEA
GO:0009615
P13501 (UniProtKB)
TAS
GO:0009636
P13501 (UniProtKB)
IDA
GO:0009651
P13501 (UniProtKB)
IEA
GO:0010535
P13501 (UniProtKB)
TAS
GO:0010759
P13501 (UniProtKB)
IDA
GO:0010820
P13501 (UniProtKB)
IDA
GO:0010820
P13501 (UniProtKB)
IDA
GO:0010820
P13501 (UniProtKB)
IDA
GO:0010820
P13501 (UniProtKB)
IDA
GO:0014068
P13501 (UniProtKB)
IDA
GO:0014823
P13501 (UniProtKB)
IEA
GO:0014911
P13501 (UniProtKB)
IDA
GO:0016004
P13501 (UniProtKB)
IDA
GO:0018894
P13501 (UniProtKB)
IEA
GO:0030298
P13501 (UniProtKB)
IDA
GO:0030335
P13501 (UniProtKB)
IDA
GO:0030593
P13501 (UniProtKB)
IBA
GO:0031328
P13501 (UniProtKB)
IDA
GO:0031584
P13501 (UniProtKB)
IDA
GO:0031622
P13501 (UniProtKB)
IEA
GO:0031663
P13501 (UniProtKB)
IDA
GO:0031726
P13501 (UniProtKB)
IPI
GO:0031726
P13501 (UniProtKB)
IPI
GO:0031726
P13501 (UniProtKB)
IDA
GO:0031726
P13501 (UniProtKB)
IPI
GO:0031726
P13501 (UniProtKB)
IPI
GO:0031726
P13501 (UniProtKB)
TAS
GO:0031729
P13501 (UniProtKB)
TAS
GO:0031730
P13501 (UniProtKB)
IPI
GO:0032868
P13501 (UniProtKB)
IEA
GO:0033634
P13501 (UniProtKB)
IDA
GO:0034112
P13501 (UniProtKB)
IDA
GO:0042056
P13501 (UniProtKB)
IDA
GO:0042102
P13501 (UniProtKB)
IDA
GO:0042119
P13501 (UniProtKB)
IDA
GO:0042327
P13501 (UniProtKB)
IDA
GO:0042379
P13501 (UniProtKB)
IPI
GO:0042379
P13501 (UniProtKB)
IPI
GO:0042493
P13501 (UniProtKB)
IEA
GO:0042531
P13501 (UniProtKB)
IDA
GO:0042803
P13501 (UniProtKB)
IDA
GO:0043491
P13501 (UniProtKB)
IMP
GO:0043547
P13501 (UniProtKB)
IBA
GO:0043621
P13501 (UniProtKB)
IDA
GO:0043623
P13501 (UniProtKB)
IDA
GO:0043627
P13501 (UniProtKB)
IEA
GO:0043922
P13501 (UniProtKB)
IDA
GO:0044344
P13501 (UniProtKB)
IEP
GO:0045070
P13501 (UniProtKB)
TAS
GO:0045071
P13501 (UniProtKB)
IDA
GO:0045089
P13501 (UniProtKB)
TAS
GO:0045666
P13501 (UniProtKB)
IEA
GO:0045672
P13501 (UniProtKB)
IEA
GO:0045744
P13501 (UniProtKB)
IDA
GO:0045766
P13501 (UniProtKB)
IEA
GO:0045785
P13501 (UniProtKB)
IDA
GO:0045948
P13501 (UniProtKB)
NAS
GO:0046427
P13501 (UniProtKB)
TAS
GO:0046817
P13501 (UniProtKB)
IDA
GO:0048245
P13501 (UniProtKB)
IDA
GO:0048246
P13501 (UniProtKB)
TAS
GO:0048247
P13501 (UniProtKB)
IEA
GO:0048661
P13501 (UniProtKB)
IDA
GO:0050679
P13501 (UniProtKB)
IEA
GO:0050729
P13501 (UniProtKB)
IBA
GO:0050796
P13501 (UniProtKB)
IDA
GO:0050863
P13501 (UniProtKB)
IDA
GO:0050918
P13501 (UniProtKB)
IEA
GO:0051262
P13501 (UniProtKB)
IDA
GO:0051384
P13501 (UniProtKB)
IEA
GO:0051928
P13501 (UniProtKB)
IDA
GO:0060754
P13501 (UniProtKB)
IEA
GO:0061098
P13501 (UniProtKB)
IEA
GO:0070098
P13501 (UniProtKB)
IDA
GO:0070098
P13501 (UniProtKB)
TAS
GO:0070100
P13501 (UniProtKB)
IEA
GO:0070233
P13501 (UniProtKB)
IDA
GO:0070234
P13501 (UniProtKB)
IDA
GO:0070374
P13501 (UniProtKB)
IBA
GO:0070723
P13501 (UniProtKB)
IEA
GO:0071230
P13501 (UniProtKB)
IEA
GO:0071307
P13501 (UniProtKB)
IEA
GO:0071315
P13501 (UniProtKB)
IEA
GO:0071346
P13501 (UniProtKB)
IEP
GO:0071347
P13501 (UniProtKB)
IEP
GO:0071356
P13501 (UniProtKB)
IEP
GO:0071361
P13501 (UniProtKB)
IEA
GO:0071403
P13501 (UniProtKB)
IEA
GO:0071407
P13501 (UniProtKB)
IDA
GO:0071448
P13501 (UniProtKB)
IEA
GO:0071560
P13501 (UniProtKB)
IEA
GO:0090026
P13501 (UniProtKB)
IDA
GO:0090026
P13501 (UniProtKB)
IDA
GO:1901214
P13501 (UniProtKB)
IDA
GO:1901215
P13501 (UniProtKB)
IEA
GO:2000110
P13501 (UniProtKB)
IEA
GO:2000406
P13501 (UniProtKB)
IDA
GO:2000503
P13501 (UniProtKB)
IDA

可能调控 CCL5基因的相关microRNA:     

Reactome

MINT

BioGrid

IntAct

mentha

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
Asthma 0.258737317 38 1 BeFree_CTD_human_GAD_LHGDN_RGD
Hyperoxaluria 0.2 1 0 CTD_human_RGD
Dermatitis, Atopic 0.127534359 10 0 BeFree_CTD_human_GAD_LHGDN
Pulmonary Fibrosis 0.122995792 2 0 BeFree_CTD_human_LHGDN
Glomerulonephritis 0.120542884 3 0 BeFree_CTD_human
Hepatitis, Alcoholic 0.120271442 2 0 BeFree_CTD_human
Hepatitis, Autoimmune 0.12 1 0 CTD_human
Peripheral Neuropathy 0.12 1 0 CTD_human
Biliary cirrhosis 0.12 1 0 CTD_human
Inflammation 0.09728386 8 0 GAD_LHGDN_RGD

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