CAPN10 (calpain 10)

symbol:
CAPN10
locus group:
protein-coding gene
location:
2q37.3
gene_family:
alias symbol:
None
alias name:
None
entrez id:
11132
ensembl gene id:
ENSG00000142330
ucsc gene id:
uc002vzk.2
refseq accession:
NM_023083
hgnc_id:
HGNC:1477
approved reserved:
1998-09-25
2q37.3
基因染色体位置图

CAPN10(钙蛋白酶10,Calpain 10)属于钙蛋白酶(Calpain)基因家族,这是一类依赖钙离子的半胱氨酸蛋白酶,参与多种细胞过程,如信号传导、细胞迁移、凋亡和肌肉蛋白降解。CAPN10主要在胰腺、肌肉和脂肪组织中表达,其编码的蛋白通过调控胰岛素分泌和葡萄糖代谢在2型糖尿病(T2DM)中起关键作用。CAPN10的生物学功能包括参与胰岛素信号通路和线粒体能量代谢,其突变(如SNP-43、SNP-19等)可能导致胰岛素抵抗和β细胞功能异常,与2型糖尿病的发病风险显著相关。若CAPN10表达降低,可能损害胰岛素分泌或加重代谢紊乱;而过表达则可能影响细胞凋亡或炎症反应。钙蛋白酶家族的共性是通过切割特定底物蛋白调控细胞功能,依赖钙离子激活且通常含有保守的蛋白酶结构域。CAPN10的某些变异体(如UCSNP-43)可能通过改变基因剪接或表达水平影响糖尿病易感性,但具体机制仍需进一步研究。此外,CAPN10还可能与肥胖和代谢综合征相关,凸显其在代谢调控中的多效性。

Calpains represent a ubiquitous, well-conserved family of calcium-dependent cysteine proteases. The calpain proteins are heterodimers consisting of an invariant small subunit and variable large subunits. The large catalytic subunit has four domains: domain I, the N-terminal regulatory domain that is processed upon calpain activation; domain II, the protease domain; domain III, a linker domain of unknown function; and domain IV, the calmodulin-like calcium-binding domain. This gene encodes a large subunit. It is an atypical calpain in that it lacks the calmodulin-like calcium-binding domain and instead has a divergent C-terminal domain. It is similar in organization to calpains 5 and 6. This gene is associated with type 2 or non-insulin-dependent diabetes mellitus (NIDDM), and is located within the NIDDM1 region. Multiple alternative transcript variants have been described for this gene. [provided by RefSeq, Sep 2010]

钙蛋白酶代表钙依赖性半胱氨酸蛋白酶的无处不在,非常保守的家庭。钙蛋白酶蛋白质是由一个不变小亚基和可变的大亚基的异源二聚体。大催化亚基有四个领域:域我,那是建立在蛋白酶活化处理的N端调节区;结构域II,蛋白酶结构域;域III,未知功能的接头结构域;和域IV,钙调蛋白样钙结合结构域。该基因编码一个大亚基。它是因为它缺乏钙调素样钙结合结构域的非典型钙蛋白酶,而是具有发散C-末端结构域。它是在组织中钙蛋白酶5和6该基因与2型或非胰岛素依赖型糖尿病(NIDDM)相关的类似,并位于NIDDM1区域内。多个可选的转录变体已被用于这个基因说明。 [由RefSeq的,2010年9月提供]

CAPN10基因的碱基序列:[NCBI]
Loading Gene Browser...
CAPN10基因的碱基突变:           仅显示部分snp
rs2953172       rs2975755       rs3749163       rs3749164       rs3833580       rs4676420       rs7596933       rs7604368       rs55650580       rs56244291       rs56352308       rs56373697       rs60704894       rs67448739       rs67940783       rs70961718       rs72999959      

CAPN10基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
TCTCCCTTAGGTCCCAGAG
59
ATCTCCTGGCTGTGAATGG
60
AAAGGTCTACGCCAAGGTC
60
CTTCAGGTTCCATCTTTCTGC
59
CTGGACCAGGTCATTCCTC
60
AAACTGCCAAATGCGACAG
60
CAGTCATACTTCGTGGAGC
58
CTTCTCTACCTTCCAGAGGT
58
CAGTCATACTTCGTGGAGC
58
CTTCTCTACCTTCCAGAGGT
58
AAGATGGAACCTGAAGGGC
60
ATGTTATCTATCACTGCTCTGGG
60
CTGGACCAGGTCATTCCTC
60
GGTCATCTGTGGTCACCTC
60
AAGATGGAACCTGAAGGGC
60
TGTTATCTATCACTGCTCTGGG
60
TTCCTCAGGGAGTTTGACG
59
CTCTGTGTAGAGGCTCTGC
60
CATCGCAACCAGGATTGAC
59
ATGATGGAGACCTCTTGGA
57
转录因子
影响基因
影响类型
参考文献链接(PubMed)
RUNX3
CAPN10
Activation

CAPN10基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

CAPN10基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0004198
B7WPF5 (UniProtKB)
IEA
GO:0005622
B7WPF5 (UniProtKB)
IEA
GO:0006508
B7WPF5 (UniProtKB)
IEA
GO:0032869
B7WPF5 (UniProtKB)
IEA
GO:0004198
H7C2P1 (UniProtKB)
IEA
GO:0005622
H7C2P1 (UniProtKB)
IEA
GO:0006508
H7C2P1 (UniProtKB)
IEA
GO:0032869
H7C2P1 (UniProtKB)
IEA
GO:0000149
Q9HC96 (UniProtKB)
ISS
GO:0004198
Q9HC96 (UniProtKB)
IMP
GO:0005623
Q9HC96 (UniProtKB)
IDA
GO:0005739
Q9HC96 (UniProtKB)
IDA
GO:0005829
Q9HC96 (UniProtKB)
ISS
GO:0005829
Q9HC96 (UniProtKB)
IDA
GO:0005886
Q9HC96 (UniProtKB)
ISS
GO:0006508
Q9HC96 (UniProtKB)
IMP
GO:0006921
Q9HC96 (UniProtKB)
IC
GO:0008092
Q9HC96 (UniProtKB)
ISS
GO:0031532
Q9HC96 (UniProtKB)
ISS
GO:0032024
Q9HC96 (UniProtKB)
IMP
GO:0032388
Q9HC96 (UniProtKB)
ISS
GO:0032869
Q9HC96 (UniProtKB)
IMP
GO:0046326
Q9HC96 (UniProtKB)
IMP
GO:0097050
Q9HC96 (UniProtKB)
IDA
GO:2000676
Q9HC96 (UniProtKB)
IEA

可能调控 CAPN10基因的相关microRNA:     

BioGrid

IntAct

mentha

String

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
Diabetes Mellitus, Non-Insulin-Dependent 0.447300406 119 6 BeFree_CLINVAR_CTD_human_GAD_LHGDN_RGD
Intellectual Disability 0.120271442 2 0 BeFree_CTD_human
DIABETES MELLITUS, NONINSULIN-DEPENDENT, 1 (disorder) 0.12 0 0 CTD_human
Diabetic Nephropathy 0.084734064 3 0 GAD_RGD
Diabetes Mellitus, Experimental 0.08 1 0 RGD
Polycystic Ovary Syndrome 0.038367907 17 0 BeFree_GAD_LHGDN
Diabetes Mellitus 0.015330228 31 0 BeFree_GAD_LHGDN
Hypertensive disease 0.015102394 5 0 BeFree_GAD_LHGDN
Atherosclerosis 0.010911214 6 1 BeFree_GAD_LHGDN
Obesity 0.009001189 8 0 BeFree_GAD

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