C4A (complement C4A (Rodgers blood group))

symbol:
C4A
locus group:
protein-coding gene
location:
6p21.33
gene_family:
Blood group antigens|Complement system
alias symbol:
CPAMD2|C4S|CO4|C4|C4A3|C4A2|C4A4|C4A6|C4B|RG
alias name:
None
entrez id:
720
ensembl gene id:
ENSG00000244731
ucsc gene id:
uc011iuc.3
refseq accession:
NM_007293
hgnc_id:
HGNC:1323
approved reserved:
2001-06-22
6p21.33
基因染色体位置图

C4A(补体成分4A,Complement Component 4A)是补体系统(免疫防御的一部分)的关键基因,属于补体C4基因家族。该家族包括C4A和C4B两个高度相似的基因,均位于人类第6号染色体的MHC III类区域(主要组织相容性复合体)。C4基因家族的共性在于编码补体C4蛋白,参与经典补体激活途径和凝集素途径,通过形成C3转化酶(将C3蛋白切割为活性片段)和C5转化酶(激活炎症反应)来清除病原体或异常细胞。C4A蛋白的生物学功能侧重于与抗原-抗体复合物中的氨基结合,促进免疫复合物的清除;而C4B更倾向于与羟基结合,直接杀伤病原体。C4A的主要作用位点是血液和细胞外基质,其表达产物(C4A蛋白)在肝脏、巨噬细胞和神经系统中也有合成。突变可能导致C4A功能缺失或表达量异常,与多种疾病相关:完全缺失与系统性红斑狼疮(SLE)风险增加3倍相关(因免疫复合物清除障碍);低表达可能加重精神分裂症(与突触修剪异常有关);而高表达可能保护 against 某些感染但可能加剧自身免疫反应。C4A过表达可能过度激活补体系统,引发炎症损伤(如肾小球肾炎);而表达降低会导致免疫复合物沉积(如SLE的狼疮肾炎)。值得注意的是,C4基因存在复杂的结构变异(如基因拷贝数变异CNV),正常人可能有1-5个C4A基因拷贝,拷贝数差异直接影响蛋白表达量。近期研究发现C4A在中枢神经系统的突触修剪(synaptic pruning,发育过程中去除多余神经连接的过程)中起关键作用,其异常表达可能通过影响小胶质细胞功能导致神经发育障碍。

This gene encodes the acidic form of complement factor 4, part of the classical activation pathway. The protein is expressed as a single chain precursor which is proteolytically cleaved into a trimer of alpha, beta, and gamma chains prior to secretion. The trimer provides a surface for interaction between the antigen-antibody complex and other complement components. The alpha chain is cleaved to release C4 anaphylatoxin, an antimicrobial peptide and a mediator of local inflammation. Deficiency of this protein is associated with systemic lupus erythematosus and type I diabetes mellitus. This gene localizes to the major histocompatibility complex (MHC) class III region on chromosome 6. Varying haplotypes of this gene cluster exist, such that individuals may have 1, 2, or 3 copies of this gene. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Nov 2014]

这个基因编码补体因子4,古典活化途径的一部分的酸性形式。该蛋白质被表达为被蛋白水解裂解为α,β,和之前分泌γ链的三聚体的单链前体。三聚体提供了一个表面,用于抗原 - 抗体复合物和其它补体成分之间的相互作用。阿尔法链裂解C4释放过敏毒素,抗菌肽和局部炎症的调解人。这种蛋白不足与系统性红斑狼疮和I型糖尿病有关。该基因定位于主要组织相容性复合体(MHC)类第三区域染色体6.变该基因簇的单倍型存在,例如,个人可以具有这种基因的1,2或3个拷贝。已发现该基因编码不同亚型的两个转录变异体。 [由RefSeq的,2014年11月提供]

C4A基因的碱基序列:[NCBI]
Loading Gene Browser...
C4A基因的碱基突变:           仅显示部分snp
rs23781       rs369924       rs392610       rs392610       rs392610       rs392610       rs395976       rs395976       rs395976       rs395976       rs406658       rs428963       rs428963       rs428963       rs428963       rs429329       rs429329      

C4A基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
AGGACCTACAGATAGAAGTGAC
59
CTCGTTTGCTTCCATCGTG
60
AAAGGAACCCTGAAGGTCC
59
GTCACTTCTATCTGTAGGTCCT
59
TTGTGTTCTGCTGAAGTCTG
58
TAACCTGGAAGCCGTACTC
58
ACTAAGCTGTCCCAAGGAG
59
AAGCATACTGACCCAATTTCTC
59
GTTCTCCGAGAAGACAGCA
60
GACATCCTTGGTGAAGTGC
59
GACCAGCCCATTTACAACC
59
CTTCTGATCCAGAGCAAAGAC
59
GGAAATACCTGGCAACTCTG
59
TGGATCTGAGGCTGTAACC
59
GGAAATACCTGGCAACTCTG
59
TGGATCTGAGGCTGTAACC
59
GTTCTCCGAGAAGACAGCA
60
GACATCCTTGGTGAAGTGC
59
GAAATATGCTGGTGAATGGAC
57
GCCCATATTCAGCTTCTCC
58
转录因子
影响基因
影响类型
参考文献链接(PubMed)
SP1
C4A
Unknown

C4A基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

C4A基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0004866
A0A0G2JPR0 (UniProtKB)
IEA
GO:0005615
A0A0G2JPR0 (UniProtKB)
IEA
GO:0006954
A0A0G2JPR0 (UniProtKB)
IEA
GO:0006956
A0A0G2JPR0 (UniProtKB)
IEA
GO:0010951
A0A0G2JPR0 (UniProtKB)
IEA
GO:0004866
A0A140TA32 (UniProtKB)
IEA
GO:0005615
A0A140TA32 (UniProtKB)
IEA
GO:0006954
A0A140TA32 (UniProtKB)
IEA
GO:0006956
A0A140TA32 (UniProtKB)
IEA
GO:0010951
A0A140TA32 (UniProtKB)
IEA
GO:0004866
A0A140TA44 (UniProtKB)
IEA
GO:0005615
A0A140TA44 (UniProtKB)
IEA
GO:0006954
A0A140TA44 (UniProtKB)
IEA
GO:0006956
A0A140TA44 (UniProtKB)
IEA
GO:0010951
A0A140TA44 (UniProtKB)
IEA
GO:0004866
A0A140TA49 (UniProtKB)
IEA
GO:0005615
A0A140TA49 (UniProtKB)
IEA
GO:0006954
A0A140TA49 (UniProtKB)
IEA
GO:0006956
A0A140TA49 (UniProtKB)
IEA
GO:0010951
A0A140TA49 (UniProtKB)
IEA
GO:0001849
P0C0L4 (UniProtKB)
IDA
GO:0004252
P0C0L4 (UniProtKB)
TAS
GO:0004252
P0C0L4 (UniProtKB)
TAS
GO:0004866
P0C0L4 (UniProtKB)
IEA
GO:0005576
P0C0L4 (UniProtKB)
TAS
GO:0005576
P0C0L4 (UniProtKB)
TAS
GO:0005576
P0C0L4 (UniProtKB)
TAS
GO:0005576
P0C0L4 (UniProtKB)
TAS
GO:0005576
P0C0L4 (UniProtKB)
TAS
GO:0005576
P0C0L4 (UniProtKB)
TAS
GO:0005576
P0C0L4 (UniProtKB)
TAS
GO:0005576
P0C0L4 (UniProtKB)
TAS
GO:0005576
P0C0L4 (UniProtKB)
TAS
GO:0005576
P0C0L4 (UniProtKB)
TAS
GO:0005576
P0C0L4 (UniProtKB)
TAS
GO:0005576
P0C0L4 (UniProtKB)
TAS
GO:0005576
P0C0L4 (UniProtKB)
TAS
GO:0005576
P0C0L4 (UniProtKB)
TAS
GO:0005576
P0C0L4 (UniProtKB)
TAS
GO:0005576
P0C0L4 (UniProtKB)
TAS
GO:0005576
P0C0L4 (UniProtKB)
TAS
GO:0005576
P0C0L4 (UniProtKB)
TAS
GO:0005576
P0C0L4 (UniProtKB)
TAS
GO:0005576
P0C0L4 (UniProtKB)
TAS
GO:0005615
P0C0L4 (UniProtKB)
IDA
GO:0005615
P0C0L4 (UniProtKB)
IDA
GO:0005886
P0C0L4 (UniProtKB)
TAS
GO:0005886
P0C0L4 (UniProtKB)
TAS
GO:0006508
P0C0L4 (UniProtKB)
IEA
GO:0006954
P0C0L4 (UniProtKB)
IEA
GO:0006956
P0C0L4 (UniProtKB)
IGI
GO:0006956
P0C0L4 (UniProtKB)
TAS
GO:0006956
P0C0L4 (UniProtKB)
TAS
GO:0006958
P0C0L4 (UniProtKB)
IEA
GO:0010951
P0C0L4 (UniProtKB)
IEA
GO:0030449
P0C0L4 (UniProtKB)
TAS
GO:0045087
P0C0L4 (UniProtKB)
IEA
GO:0070062
P0C0L4 (UniProtKB)
IDA
GO:0072562
P0C0L4 (UniProtKB)
IDA
GO:2000427
P0C0L4 (UniProtKB)
IGI

可能调控 C4A基因的相关microRNA:     

Reactome

BioGrid

IntAct

mentha

String

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
Lupus Erythematosus, Systemic 0.23409085 26 0 BeFree_CTD_human_GAD_LHGDN_MGD
Behcet Syndrome 0.12 0 0 ORPHANET
Immunologic Deficiency Syndromes 0.12 1 0 CTD_human
Autoimmune Diseases 0.008630058 6 0 BeFree_GAD_LHGDN
Lupus Erythematosus 0.00764398 5 0 BeFree_GAD
Congenital adrenal hyperplasia 0.003181358 4 0 BeFree_GAD
Psoriasis 0.002995792 2 0 BeFree_LHGDN
Juvenile arthritis 0.002995792 2 0 BeFree_LHGDN
Graves Disease 0.002909916 2 0 BeFree_GAD
Chronic Obstructive Airway Disease 0.00272435 1 0 LHGDN

联系方式

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