BRMS1 (BRMS1 transcriptional repressor and anoikis regulator)

symbol:
BRMS1
locus group:
protein-coding gene
location:
11q13.2
gene_family:
alias symbol:
DKFZP564A063
alias name:
None
entrez id:
25855
ensembl gene id:
ENSG00000174744
ucsc gene id:
uc001ohp.2
refseq accession:
NM_015399
hgnc_id:
HGNC:17262
approved reserved:
2003-12-02
11q13.2
基因染色体位置图

This gene reduces the metastatic potential, but not the tumorogenicity, of human breast cancer and melanoma cell lines. The protein encoded by this gene localizes primarily to the nucleus and is a component of the mSin3a family of histone deacetylase complexes (HDAC). The protein contains two coiled-coil motifs and several imperfect leucine zipper motifs. Alternative splicing results in two transcript variants encoding different isoforms. [provided by RefSeq, Jul 2008]

该基因降低的转移潜能,但不是瘤性人乳腺癌和黑素瘤细胞系的。由该基因编码的蛋白定位主要是细胞核和为mSin3a家庭组蛋白脱乙酰复合物(HDAC)的一个组件。蛋白质含有两个卷曲螺旋图案和一些不完善的亮氨酸拉链图案。两个转录剪接变异体导致编码不同亚型。 [由RefSeq的,2008年7月提供]

CCND1基因的碱基序列:[NCBI]
Loading Gene Browser...
BRMS1基因的碱基突变:           仅显示部分snp
rs1044139       rs1190624       rs1190625       rs2298467       rs3741369       rs11537992       rs11600373       rs35429253       rs75171367       rs76954213       rs79642305       rs113570160       rs117338501       rs139287952       rs140012343       rs141108052       rs142956522      

BRMS1基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
TCTACAAGGGCTTCTGTCTG
59
CTTCTCACTCTCCAGGTGC
60
CTCTCAGGGAATCTCCGTC
59
TTCTGTGTCTTTGCTTGGAG
59
GATGAGGACTATGAGCGAC
57
CTGAACAACTTCTCCTTTAGC
57
GATGAGGACTATGAGCGAC
57
CTGAACAACTTCTCCTTTAGC
57
TCTACAAGGGCTTCTGTCTG
59
CTTCTCACTCTCCAGGTGC
60
TCTACAAGGGCTTCTGTCTG
59
CTTCTCACTCTCCAGGTGC
60
AATCGGATGGACCTTGACC
60
GGAAGACGAGAATCCTGGG
60
TTCAGGGAACGACTGAGTC
59
TTGTAGATCCCTGAATGCGA
59
TTCAGGGAACGACTGAGTC
59
CTTGTAGATCCCTGCCACC
60
TCTACAAGGGCTTCTGTCTG
59
CTTCTCACTCTCCAGGTGC
60
      尚未收录相关数据

BRMS1基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

BRMS1基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0009987
G5E9I4 (UniProtKB)
IEA
GO:0000122
Q9HCU9 (UniProtKB)
IBA
GO:0004407
Q9HCU9 (UniProtKB)
TAS
GO:0005515
Q9HCU9 (UniProtKB)
IPI
GO:0005515
Q9HCU9 (UniProtKB)
IPI
GO:0005515
Q9HCU9 (UniProtKB)
IPI
GO:0005515
Q9HCU9 (UniProtKB)
IPI
GO:0005515
Q9HCU9 (UniProtKB)
IPI
GO:0005515
Q9HCU9 (UniProtKB)
IPI
GO:0005515
Q9HCU9 (UniProtKB)
IPI
GO:0005515
Q9HCU9 (UniProtKB)
IPI
GO:0005515
Q9HCU9 (UniProtKB)
IPI
GO:0005515
Q9HCU9 (UniProtKB)
IPI
GO:0005515
Q9HCU9 (UniProtKB)
IPI
GO:0005515
Q9HCU9 (UniProtKB)
IPI
GO:0005515
Q9HCU9 (UniProtKB)
IPI
GO:0005515
Q9HCU9 (UniProtKB)
IPI
GO:0005515
Q9HCU9 (UniProtKB)
IPI
GO:0005515
Q9HCU9 (UniProtKB)
IPI
GO:0005515
Q9HCU9 (UniProtKB)
IPI
GO:0005515
Q9HCU9 (UniProtKB)
IPI
GO:0005515
Q9HCU9 (UniProtKB)
IPI
GO:0005634
Q9HCU9 (UniProtKB)
IDA
GO:0005634
Q9HCU9 (UniProtKB)
IDA
GO:0005654
Q9HCU9 (UniProtKB)
TAS
GO:0005737
Q9HCU9 (UniProtKB)
IDA
GO:0006351
Q9HCU9 (UniProtKB)
IEA
GO:0006915
Q9HCU9 (UniProtKB)
IEA
GO:0016575
Q9HCU9 (UniProtKB)
IBA
GO:0032088
Q9HCU9 (UniProtKB)
IDA
GO:0042826
Q9HCU9 (UniProtKB)
IBA
GO:0045892
Q9HCU9 (UniProtKB)
IDA
GO:0051059
Q9HCU9 (UniProtKB)
IDA
GO:0070822
Q9HCU9 (UniProtKB)
IBA
GO:0090312
Q9HCU9 (UniProtKB)
IDA
GO:2000210
Q9HCU9 (UniProtKB)
IMP
GO:0004407
Q9HCU9 (UniProtKB)
IBA

可能调控 BRMS1基因的相关microRNA:     

MINT

BioGrid

IntAct

mentha

String

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
Neoplasm Metastasis 0.026369588 59 0 BeFree_LHGDN
Mammary Neoplasms 0.01225461 9 0 BeFree_LHGDN
Breast Carcinoma 0.009500466 35 0 BeFree
Malignant neoplasm of breast 0.009500466 35 0 BeFree
melanoma 0.008434561 12 0 BeFree_LHGDN
Lung Neoplasms 0.005720142 3 0 BeFree_LHGDN
Non-Small Cell Lung Carcinoma 0.002171535 8 0 BeFree
Tumor Progression 0.001357209 5 0 BeFree
Carcinoma breast stage IV 0.000814326 3 0 BeFree
Malignant neoplasm of ovary 0.000814326 3 0 BeFree

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