ABCD4 (ATP binding cassette subfamily D member 4)

symbol:
ABCD4
locus group:
protein-coding gene
location:
14q24.3
gene_family:
ATP-binding cassette, sub-family D (ALD)
alias symbol:
PMP69|P70R|EST352188
alias name:
None
entrez id:
5826
ensembl gene id:
ENSG00000119688
ucsc gene id:
uc001xpr.3
refseq accession:
NM_005050
hgnc_id:
HGNC:68
approved reserved:
1997-10-27
14q24.3
基因染色体位置图

ABCD4(ATP-binding cassette subfamily D member 4)属于ABC转运蛋白超家族中的D亚家族(ABCD家族),该家族成员均为位于过氧化物酶体膜上的转运蛋白,负责将特定底物(如极长链脂肪酸、胆汁酸前体等)转运至过氧化物酶体内进行代谢。ABCD4与其他家族成员(如ABCD1、ABCD2、ABCD3)具有相似结构,均包含跨膜结构域和核苷酸结合域,依赖ATP水解提供能量完成底物转运。ABCD4特异性参与维生素B12(钴胺素)的代谢,负责将维生素B12从溶酶体转运至细胞质,这一过程对维生素B12的活化至关重要。若ABCD4发生功能丧失性突变(如错义突变、无义突变或剪切位点突变),会导致维生素B12在溶酶体内蓄积而无法被利用,引发遗传性维生素B12代谢障碍——甲基丙二酸血症合并同型半胱氨酸尿症(cblJ型),临床表现为发育迟缓、神经系统异常、血液系统异常等。过表达ABCD4可能增强维生素B12的胞内转运效率,但具体生理影响尚不明确;而表达降低则直接导致维生素B12代谢缺陷。ABCD4与ABCD1(导致肾上腺脑白质营养不良的基因)功能相关但底物特异性不同,反映了该家族成员通过转运不同底物共同维持过氧化物酶体功能的特性。目前针对ABCD4相关疾病主要采取维生素B12补充治疗,但疗效因突变类型而异。研究还发现ABCD4与溶酶体功能密切相关,其异常可能间接影响溶酶体储存障碍疾病进程。

The protein encoded by this gene is a member of the superfamily of ATP-binding cassette (ABC) transporters. ABC proteins transport various molecules across extra- and intra-cellular membranes. ABC genes are divided into seven distinct subfamilies (ABC1, MDR/TAP, MRP, ALD, OABP, GCN20, White). This protein is a member of the ALD subfamily, which is involved in peroxisomal import of fatty acids and/or fatty acyl-CoAs in the organelle. All known peroxisomal ABC transporters are half transporters which require a partner half transporter molecule to form a functional homodimeric or heterodimeric transporter. The function of this peroxisomal membrane protein is unknown. However, it is speculated that it may function as a heterodimer for another peroxisomal ABC transporter and, therefore, may modify the adrenoleukodystrophy phenotype. It may also play a role in the process of peroxisome biogenesis. Alternative splicing results in at least two different transcript variants, one which is protein-coding and one which is probably not protein-coding. [provided by RefSeq, Jul 2008]

该基因编码的蛋白是ATP结合盒(ABC)转运超家族中的一员。 ABC蛋白质跨越预算外内和细胞膜输送各种分子。 ABC基因被分为七个不同亚科(ABC1,MDR / TAP,MRP,ALD,OABP,GCN20,白色)。这种蛋白质是ALD亚科,其涉及的脂肪酸和/或脂肪酰基辅酶A中的细胞器的过氧化物酶体进口的一个成员。所有已知的过氧化物酶ABC转运是需要一个伙伴半转运分子形成功能同二聚体或异二聚体转运一半转运。此过氧化物酶体膜蛋白的功能是未知的。然而,据推测,这可能为另一个过氧化物酶ABC转运异源二聚体发挥作用,因此,可能会修改肾上腺脑白质表型。它也可起到过氧化物酶体生物合成的过程中发挥作用。选择性剪接的结果在至少两个不同的转录物变体,其中之一是蛋白质编码和其中一个可能不是蛋白质编码。 [由RefSeq的,2008年7月提供]

ABCD4基因的碱基序列:[NCBI]
Loading Gene Browser...
ABCD4基因的碱基突变:           仅显示部分snp
rs2466       rs8618       rs929449       rs1052000       rs1052006       rs1052008       rs1052012       rs1052022       rs1052091       rs2074945       rs2074946       rs2301345       rs2301346       rs2301347       rs2301348       rs3213498       rs3213499      

ABCD4基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向Tm值
反向引物序列
反向Tm值
评分
TCAGCAAGAATGCCTTTGTG
60
GACTTCAGGGACATGTCCA
59
CTTTCCTCAGGTATGATGTTCTG
59
GTGGCTTCATCAAGCACTG
60
CAGGCCCAGGTTAGATCTG
60
CACAAATTGCTCCAGTAGGG
59
CGGACTCTACCCAGTACTG
59
CAGATCTAACCTGGGCCTG
60
GTTCTTGGAATTGGCAGGC
60
GAACATCATACCAGTTCCAGTC
59
TTAGGTTCAAGCACATGCAG
59
TGTTGATGCCGATGTACAG
58
CCCTCTGGGTCTGTTACAG
59
ACATCATACCAGTTCCAGTCC
60
CAGTGCTTCCAAAGCACAG
60
GATGCACCAGCTTCATCAC
59
CCATTCTTCACTGACGGGA
59
CTAAGGAGGACCAGCTCAC
59
TACCCAGTACTGAACTAGGG
58
GATCACAAATTGCTCTGGC
57
      尚未收录相关数据

ABCD4基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

" d="M482.414,245.296c3.539,4.293,4.455,10.009,0.202,11 c-4.244,0.996-4.983-10.983-8.293-8.438c-5.271,4.08,9.834,12.271,5.144,17.287c-3.717,3.607-6.172-5.75-10.839-1.976 c-4.673,3.776,6.781,7.299,2.831,11.326c-4.354,4.045-6.979-1.449-9.837-5.517c-1.193-1.742-2.059-3.851-3.595-2.748 c-1.516,1.078-1.854,1.795-0.938,3.666c2.374,4.854,9.235,10.119,5.156,12.535c-5.636,3.346-5.044-8.871-9.426-7.574 c-4.388,1.291,2.557,10.66-1.245,11.141c-4.089,0.545-3.483-10.239-6.979-8.575c-2.522,1.206-0.929,3.071-0.938,4.899 c0.004,1.32-0.964,3.6-2.372,4.062c-3.593,1.171-8.544-1.065-10.251-3.59c-6.04-8.93,0.396-15.997,4.639-7.015 c3.023,4.642,5.182,0.834,2.839-2.219c-1.032-1.354-4.309-5.901-0.781-7.252c2.904-1.113,4.271,1.941,5.985,4.592 c2.61,4.016,5.485,0.117,3.031-3.414c-1.828-2.633-2.74-3.803,3.156-7.42c6.405-4.369,6.52,3.869,10.077,0.646 c2.309-1.832-4.783-5.149,0.06-8.995c2.896-2.293,5.18,6.207,7.961,3.516c3.523-2.737-7.717-7.369,0.117-11.736 C473.413,240.77,480.519,242.891,482.414,245.296z"/> Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 质膜
  • 细胞质
  • 细胞外
  • 高尔基体
  • 囊泡
  • 细胞骨架
  • 内质网
  • 细胞核
  • 内体
  • 溶酶体
  • 线粒体

ABCD4基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0005524
E9PI46 (UniProtKB)
IEA
GO:0016021
E9PI46 (UniProtKB)
IEA
GO:0042626
E9PI46 (UniProtKB)
IEA
GO:0055085
E9PI46 (UniProtKB)
IEA
GO:0005524
G3V3W1 (UniProtKB)
IEA
GO:0016021
G3V3W1 (UniProtKB)
IEA
GO:0042626
G3V3W1 (UniProtKB)
IEA
GO:0055085
G3V3W1 (UniProtKB)
IEA
GO:0005524
G3V4U7 (UniProtKB)
IEA
GO:0016021
G3V4U7 (UniProtKB)
IEA
GO:0042626
G3V4U7 (UniProtKB)
IEA
GO:0055085
G3V4U7 (UniProtKB)
IEA
GO:0005524
H0YCY9 (UniProtKB)
IEA
GO:0016887
H0YCY9 (UniProtKB)
IEA
GO:0005524
H0YJ78 (UniProtKB)
IEA
GO:0016887
H0YJ78 (UniProtKB)
IEA
GO:0005524
H0YJ82 (UniProtKB)
IEA
GO:0016887
H0YJ82 (UniProtKB)
IEA
GO:0005524
H0YJL8 (UniProtKB)
IEA
GO:0016021
H0YJL8 (UniProtKB)
IEA
GO:0042626
H0YJL8 (UniProtKB)
IEA
GO:0055085
H0YJL8 (UniProtKB)
IEA
GO:0005524
H0YJX8 (UniProtKB)
IEA
GO:0016021
H0YJX8 (UniProtKB)
IEA
GO:0042626
H0YJX8 (UniProtKB)
IEA
GO:0055085
H0YJX8 (UniProtKB)
IEA
GO:0005524
O14678 (UniProtKB)
NAS
GO:0005765
O14678 (UniProtKB)
TAS
GO:0005777
O14678 (UniProtKB)
IDA
GO:0005777
O14678 (UniProtKB)
IDA
GO:0005778
O14678 (UniProtKB)
IEA
GO:0005789
O14678 (UniProtKB)
IEA
GO:0009235
O14678 (UniProtKB)
IMP
GO:0009235
O14678 (UniProtKB)
TAS
GO:0016021
O14678 (UniProtKB)
NAS
GO:0042626
O14678 (UniProtKB)
NAS
GO:0042626
O14678 (UniProtKB)
TAS
GO:0043190
O14678 (UniProtKB)
NAS
GO:0055085
O14678 (UniProtKB)
NAS

可能调控 ABCD4基因的相关microRNA:     

BioGrid

IntAct

mentha

String

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
METHYLMALONIC ACIDURIA AND HOMOCYSTINURIA, cblJ TYPE 0.36 1 2 CLINVAR_ORPHANET_UNIPROT
Disease Progression 0.12 1 0 CTD_human
Colorectal Neoplasms 0.12 1 0 CTD_human
Inborn Errors of Metabolism 0.12 1 0 CTD_human
Vitamin B 12 Deficiency 0.12 1 0 CTD_human
Adrenoleukodystrophy 0.003267234 2 0 BeFree_LHGDN
Adrenomyeloneuropathy 0.000271442 1 0 BeFree

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