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PMID: 9927721 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

JPred: a consensus secondary structure prediction server.

Bioinformatics (Oxford, England) ·Vol. 14 ·No. 10 ·1998-00-00 ·Pages 892-3

Cuff JA, Clamp ME, Siddiqui AS, Finlay M, Barton GJ

Abstract

An interactive protein secondary structure prediction Internet server is presented. The server allows a single sequence or multiple alignment to be submitted, and returns predictions from six secondary structure prediction algorithms that exploit evolutionary information from multiple sequences. A consensus prediction is also returned which improves the average Q3 accuracy of prediction by 1% to 72.9%. The server simplifies the use of current prediction algorithms and allows conservation patterns important to structure and function to be identified. http://barton.ebi.ac.uk/servers/jpred.h tml geoff@ebi.ac.uk

MeSH Terms
Algorithms Computational Biology Consensus Sequence Internet Protein Structure, Secondary Sequence Alignment Software
Authors & Affiliations
5 authors, click to expand affiliations / ORCID
Cuff J A
Laboratory of Molecular Biophysics, Rex Richards Building, South Parks Road, Oxford OX1 3QU, UK.
Clamp M E
Siddiqui A S
Finlay M
Barton G J
Article Info
Journal
Bioinformatics (Oxford, England)
Abbr.
Bioinformatics
ISSN
1367-4803
Published
1998-00-00
Pages
892-3
Language
English
Region
England
NLM ID
9808944
Subset
IM
Analysis Services
Analysis Services

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