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PMID: 9770450 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, Non-P.H.S. Research Support, U.S. Gov't, P.H.S.

Crystal structure of the BTB domain from PLZF.

Ahmad KF, Engel CK, Privé GG

Abstract

The BTB domain (also known as the POZ domain) is an evolutionarily conserved protein-protein interaction motif found at the N terminus of 5-10% of C2H2-type zinc-finger transcription factors, as well as in some actin-associated proteins bearing the kelch motif. Many BTB proteins are transcriptional regulators that mediate gene expression through the control of chromatin conformation. In the human promyelocytic leukemia zinc finger (PLZF) protein, the BTB domain has transcriptional repression activity, directs the protein to a nuclear punctate pattern, and interacts with components of the histone deacetylase complex. The association of the PLZF BTB domain with the histone deacetylase complex provides a mechanism of linking the transcription factor with enzymatic activities that regulate chromatin conformation. The crystal structure of the BTB domain of PLZF was determined at 1.9 A resolution and reveals a tightly intertwined dimer with an extensive hydrophobic interface. Approximately one-quarter of the monomer surface area is involved in the dimer intermolecular contact. These features are typical of obligate homodimers, and we expect the full-length PLZF protein to exist as a branched transcription factor with two C-terminal DNA-binding regions. A surface-exposed groove lined with conserved amino acids is formed at the dimer interface, suggestive of a peptide-binding site. This groove may represent the site of interaction of the PLZF BTB domain with nuclear corepressors or other nuclear proteins.

MeSH Terms
Amino Acid Sequence Binding Sites DNA-Binding Proteins/chemistry,metabolism Humans Kruppel-Like Transcription Factors Ligands Molecular Sequence Data Promyelocytic Leukemia Zinc Finger Protein Protein Conformation Sequence Homology, Amino Acid Transcription Factors/chemistry,metabolism X-Ray Diffraction Zinc Fingers
Chemicals
DNA-Binding Proteins Kruppel-Like Transcription Factors Ligands Promyelocytic Leukemia Zinc Finger Protein Transcription Factors ZBTB16 protein, human
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Ahmad K F
Division of Molecular and Structural Biology, Ontario Cancer Institute, and the Department of Medical Biophysics, University of Toronto, 610 University Avenue, Toronto, Ontario, Canada M5G 2M9.
Engel C K
Privé G G
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Article Info
Journal
Proceedings of the National Academy of Sciences of the United States of America
Abbr.
Proc Natl Acad Sci U S A
ISSN
0027-8424
Published
1998-10-13
Pages
12123-8
Language
English
Region
United States
NLM ID
7505876
PMCID
PMC22795
Subset
IM
Grants
NCRR NIH HHS · P41 RR001646 · United States
NCRR NIH HHS · RR-01646 · United States
Databases
PDB
Analysis Services
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