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PMID: 9755862 Published · ppublish English Journal Article

Following G-quartet formation by UV-spectroscopy.

FEBS letters ·Vol. 435 ·No. 1 ·1998-09-11 ·Pages 74-8

Mergny JL, Phan AT, Lacroix L

Abstract

Oligodeoxynucleotides which include stretches of guanines form a well-known tetrameric structure. We show that the recording of reversible absorbance changes at 295 nm allows to precisely monitor intramolecular guanine (G)-quartet formation and dissociation. Accurate Tm and thermodynamic values could be easily extracted from the data, whereas classical recordings at 260 nm led to a much larger uncertainty and in extreme cases, to completely inaccurate measurements. This inverted denaturation profile was observed for all G-quartet-forming oligonucleotides studied so far. This technique is very useful in all cases where intramolecular or intermolecular quadruplex formation is suspected.

MeSH Terms
DNA/chemistry Dimerization G-Quadruplexes Guanine/chemistry HIV-1 Nucleic Acid Conformation Oligodeoxyribonucleotides/chemistry Oligonucleotides, Antisense/chemistry RNA, Viral/chemistry Spectrophotometry, Ultraviolet Thermodynamics
Chemicals
Oligodeoxyribonucleotides Oligonucleotides, Antisense RNA, Viral Guanine DNA
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Mergny J L
Laboratoire de Biophysique, Muséum National d'Histoire Naturelle INSERM U201, CNRS URA 481, Paris, France. mergny@lovelace.infobiogen.fr
Phan A T
Lacroix L
Article Info
Journal
FEBS letters
Abbr.
FEBS Lett
ISSN
0014-5793
Published
1998-09-11
Pages
74-8
Language
English
Region
England
NLM ID
0155157
Subset
IM
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