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PMID: 9723623 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Structure of a cephalosporin synthase.

Nature ·Vol. 394 ·No. 6695 ·1998-08-20 ·Pages 805-9

Valegård K, van Scheltinga AC, Lloyd MD, Hara T, Ramaswamy S, Perrakis A, Thompson A, Lee HJ, Baldwin JE, Schofield CJ, Hajdu J, Andersson I

Abstract

Penicillins and cephalosporins are among the most widely used therapeutic agents. These antibiotics are produced from fermentation-derived materials as their chemical synthesis is not commercially viable. Unconventional steps in their biosynthesis are catalysed by Fe(II)-dependent oxidases/oxygenases; isopenicillin N synthase (IPNS) creates in one step the bicyclic nucleus of penicillins, and deacetoxycephalosporin C synthase (DAOCS) catalyses the expansion of the penicillin nucleus into the nucleus of cephalosporins. Both enzymes use dioxygen-derived ferryl intermediates in catalysis but, in contrast to IPNS, the ferryl form of DAOCS is produced by the oxidative splitting of a co-substrate, 2-oxoglutarate (alpha-ketoglutarate). This route of controlled ferryl formation and reaction is common to many mononuclear ferrous enzymes, which participate in a broader range of reactions than their well-characterized counterparts, the haem enzymes. Here we report the first crystal structure of a 2-oxoacid-dependent oxygenase. High-resolution structures for apo-DAOCS, the enzyme complexed with Fe(II), and with Fe(II) and 2-oxoglutarate, were obtained from merohedrally twinned crystals. Using a model based on these structures, we propose a mechanism for ferryl formation.

MeSH Terms
Cloning, Molecular Crystallography, X-Ray Escherichia coli Ferrous Compounds/chemistry Intramolecular Transferases/chemistry Ketoglutaric Acids/chemistry Models, Molecular Oxidoreductases/chemistry Oxygen/chemistry Penicillin-Binding Proteins Protein Conformation Streptomyces/enzymology
Chemicals
Ferrous Compounds Ketoglutaric Acids Penicillin-Binding Proteins Oxidoreductases isopenicillin N synthetase Intramolecular Transferases deacetoxycephalosporin C synthetase Oxygen
Authors & Affiliations
12 authors, click to expand affiliations / ORCID
Valegård K
Department of Biochemistry, Uppsala University, Sweden.
van Scheltinga A C
Lloyd M D
Hara T
Ramaswamy S
Perrakis A
Thompson A
Lee H J
Baldwin J E
Schofield C J
Hajdu J
Andersson I
Article Info
Journal
Nature
Abbr.
Nature
ISSN
0028-0836
Published
1998-08-20
Pages
805-9
Language
English
Region
England
NLM ID
0410462
Subset
IM
Databases
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