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PMID: 9482865 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, Non-P.H.S. Research Support, U.S. Gov't, P.H.S.

Germacrene C synthase from Lycopersicon esculentum cv. VFNT cherry tomato: cDNA isolation, characterization, and bacterial expression of the multiple product sesquiterpene cyclase.

Colby SM, Crock J, Dowdle-Rizzo B, Lemaux PG, Croteau R

Abstract

Germacrene C was found by GC-MS and NMR analysis to be the most abundant sesquiterpene in the leaf oil of Lycopersicon esculentum cv. VFNT Cherry, with lesser amounts of germacrene A, guaia-6,9-diene, germacrene B, beta-caryophyllene, alpha-humulene, and germacrene D. Soluble enzyme preparations from leaves catalyzed the divalent metal ion-dependent cyclization of [1-3H]farnesyl diphosphate to these same sesquiterpene olefins, as determined by radio-GC. To obtain a germacrene synthase cDNA, a set of degenerate primers was constructed based on conserved amino acid sequences of related terpenoid cyclases. With cDNA prepared from leaf epidermis-enriched mRNA, these primers amplified a 767-bp fragment that was used as a hybridization probe to screen the cDNA library. Thirty-one clones were evaluated for functional expression of terpenoid cyclase activity in Escherichia coli by using labeled geranyl, farnesyl, and geranylgeranyl diphosphates as substrates. Nine cDNA isolates expressed sesquiterpene synthase activity, and GC-MS analysis of the products identified germacrene C with smaller amounts of germacrene A, B, and D. None of the expressed proteins was active with geranylgeranyl diphosphate; however, one truncated protein converted geranyl diphosphate to the monoterpene limonene. The cDNA inserts specify a deduced polypeptide of 548 amino acids (Mr = 64,114), and sequence comparison with other plant sesquiterpene cyclases indicates that germacrene C synthase most closely resembles cotton delta-cadinene synthase (50% identity).

MeSH Terms
Alkyl and Aryl Transferases/biosynthesis,chemistry,isolation & purification Amino Acid Sequence Carbon-Carbon Lyases/biosynthesis,chemistry,isolation & purification Cloning, Molecular Conserved Sequence DNA Primers Escherichia coli Lycopersicon esculentum/enzymology Molecular Sequence Data Plant Oils Polyisoprenyl Phosphates/metabolism Polymerase Chain Reaction Recombinant Proteins/biosynthesis,chemistry,isolation & purification Sesquiterpenes/chemistry,metabolism
Chemicals
DNA Primers Plant Oils Polyisoprenyl Phosphates Recombinant Proteins Sesquiterpenes farnesyl pyrophosphate Alkyl and Aryl Transferases germacrene C synthase Carbon-Carbon Lyases trichodiene synthetase
Authors & Affiliations
5 authors, click to expand affiliations / ORCID
Colby S M
U.S. Department of Agriculture/University of California, Berkeley, Plant Gene Expression Center and Department of Plant and Microbial Biology, University of California, Berkeley, CA 94720, USA.
Crock J
Dowdle-Rizzo B
Lemaux P G
Croteau R
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15 references, click to expand
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Article Info
Journal
Proceedings of the National Academy of Sciences of the United States of America
Abbr.
Proc Natl Acad Sci U S A
ISSN
0027-8424
Published
1998-03-03
Pages
2216-21
Language
English
Region
United States
NLM ID
7505876
PMCID
PMC19298
Subset
IM
Grants
NIGMS NIH HHS · R37 GM031354 · United States
NIGMS NIH HHS · GM31354 · United States
Databases
GENBANK
AF035630, AF035631
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