Home LiteratureArticle Details
PMID: 9473524 Published · ppublish English Comparative Study Journal Article Research Support, Non-U.S. Gov't

A novel extracellular domain variant of the human integrin alpha 7 subunit generated by alternative intron splicing.

Biochemical and biophysical research communications ·Vol. 243 ·No. 1 ·1998-02-04 ·Pages 317-25

Leung E, Lim SP, Berg R, Yang Y, Ni J, Wang SX, Krissansen GW

Abstract

The integrin alpha 7 beta 1 laminin receptor, which is expressed on replicating myoblasts, and upregulated during myogenic differentiation, is involved in cell adhesion and communication between muscle cells and the extracellular matrix. It is a major cell-surface substrate in skeletal muscle cells for the cell-surface, argininespecific, ADP-ribosyltransferase. Both the extracellular and cytoplasmic domains of the mouse alpha 7 subunit undergo alternative splicing during development, generating differentially expressed variants with presumably unique ligand-binding and signalling properties. Here human cDNA clones isolated from a fetal heart lambda gt10 cDNA library encoded the complete sequence of the alpha 7 subunit and hybridised to a single major 4.4 kb alpha 7 subunit transcript abundantly expressed in human skeletal muscle, moderately expressed in heart, and weakly expressed in most other tissues. One clone out of four contained a novel 225-nucleotide in-frame deletion corresponding to 75 amino acids in the C-terminal region of the extracellular domain. The variant, whose expression appears to be tissue-specific, is created by alternative splicing at sites flanking an intron in the alpha 7 gene. A related mouse form was identified in P19 embryonal carcinoma cells. Deletion of the spliced region, which either contains or is in very close proximity to the major ADP-ribosylation site of the alpha 7 subunit, may serve to modulate the effects of ADP-ribosylation, or alternatively molecular associations, and receptor-ligand affinity.

MeSH Terms
Alternative Splicing Amino Acid Sequence Animals Antigens, CD/chemistry,genetics,metabolism Base Sequence Cloning, Molecular DNA Primers/genetics DNA, Complementary/genetics Extracellular Matrix/chemistry Genetic Variation Humans Integrin alpha Chains Introns Mice Molecular Sequence Data Protein Conformation RNA, Messenger/genetics,metabolism Rats Sequence Homology, Amino Acid Species Specificity Tissue Distribution
Chemicals
Antigens, CD DNA Primers DNA, Complementary Integrin alpha Chains RNA, Messenger integrin alpha7
Authors & Affiliations
7 authors, click to expand affiliations / ORCID
Leung E
Department of Molecular Medicine, School of Medicine and Health Sciences, University of Auckland, New Zealand.
Lim S P
Berg R
Yang Y
Ni J
Wang S X
Krissansen G W
Article Info
Journal
Biochemical and biophysical research communications
Abbr.
Biochem Biophys Res Commun
ISSN
0006-291X
Published
1998-02-04
Pages
317-25
Language
English
Region
United States
NLM ID
0372516
Subset
IM
Databases
GENBANK
AF032108
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com