Home LiteratureArticle Details
PMID: 9414239 Published · ppublish English Comparative Study Journal Article Research Support, Non-U.S. Gov't

Determination of interspin distances between spin labels attached to insulin: comparison of electron paramagnetic resonance data with the X-ray structure.

Biophysical journal ·Vol. 73 ·No. 6 ·1997-12-00 ·Pages 3287-98

Steinhoff HJ, Radzwill N, Thevis W, Lenz V, Brandenburg D, Antson A, Dodson G, Wollmer A

Abstract

A method was developed to determine the interspin distances of two or more nitroxide spin labels attached to specific sites in proteins. This method was applied to different conformations of spin-labeled insulins. The electron paramagnetic resonance (EPR) line broadening due to dipolar interaction is determined by fitting simulated EPR powder spectra to experimental data, measured at temperatures below 200 K to freeze the protein motion. The experimental spectra are composed of species with different relative nitroxide orientations and interspin distances because of the flexibility of the spin label side chain and the variety of conformational substates of proteins in frozen solution. Values for the average interspin distance and for the distance distribution width can be determined from the characteristics of the dipolar broadened line shape. The resulting interspin distances determined for crystallized insulins in the R6 and T6 structure agree nicely with structural data obtained by x-ray crystallography and by modeling of the spin-labeled samples. The EPR experiments reveal slight differences between crystal and frozen solution structures of the B-chain amino termini in the R6 and T6 states of hexameric insulins. The study of interspin distances between attached spin labels can be applied to obtain structural information on proteins under conditions where other methods like two-dimensional nuclear magnetic resonance spectroscopy or x-ray crystallography are not applicable.

MeSH Terms
Biophysical Phenomena Biophysics Crystallography, X-Ray Electron Spin Resonance Spectroscopy Freezing Insulin/chemistry Models, Molecular Protein Conformation Solutions Spin Labels
Chemicals
Insulin Solutions Spin Labels
Authors & Affiliations
8 authors, click to expand affiliations / ORCID
Steinhoff H J
Lehrstuhl für Biophysik, Ruhr-Universität Bochum, Germany. hjs@bph.ruhr-unibochum.de
Radzwill N
Thevis W
Lenz V
Brandenburg D
Antson A
Dodson G
Wollmer A
References (18)
18 references, click to expand
  1. Phenol-promoted structural transformation of insulin in solution.
    Biol Chem Hoppe Seyler. 1987 Aug;368(8):903-11 PMID: 3311071
  2. Spin-labeling studies of the conformational changes in the vicinity of D36, D38, T46, and E161 of bacteriorhodopsin during the photocycle.
    Biophys J. 1997 Aug;73(2):983-93 PMID: 9251815
  3. Phenol stabilizes more helix in a new symmetrical zinc insulin hexamer.
    Nature. 1989 Apr 13;338(6216):594-6 PMID: 2648161
  4. A simple method for determination of rotational correlation times and separation of rotational and polarity effects from EPR spectra of spin-labeled biomolecules in a wide correlation time range.
    J Biochem Biophys Methods. 1988 Dec;17(4):237-47 PMID: 2854146
  5. Residual motion of hemoglobin-bound spin labels as a probe for protein dynamics.
    Z Naturforsch C. 1989 Mar-Apr;44(3-4):280-8 PMID: 2545217
  6. Position-dependent local motions in spin-labeled analogues of a short alpha-helical peptide determined by electron spin resonance.
    Biochemistry. 1991 Oct 1;30(39):9498-503 PMID: 1654100
  7. Two dimensional diffusion of small molecules on protein surfaces: an EPR study of the restricted translational diffusion of protein-bound spin labels.
    Eur Biophys J. 1991;20(5):293-303 PMID: 1664324
  8. Short alanine-based peptides may form 3(10)-helices and not alpha-helices in aqueous solution.
    Nature. 1992 Oct 15;359(6396):653-5 PMID: 1328890
  9. Colicin E1 binding to membranes: time-resolved studies of spin-labeled mutants.
    Science. 1993 Feb 12;259(5097):960-3 PMID: 8382373
  10. Experimental molecular dynamics of an alanine-based helical peptide determined by spin label electron spin resonance.
    Biochemistry. 1993 Aug 10;32(31):8014-21 PMID: 8394121
  11. Increasing sequence length favors alpha-helix over 3(10)-helix in alanine-based peptides: evidence for a length-dependent structural transition.
    Biochemistry. 1993 Nov 16;32(45):11957-62 PMID: 8218270
  12. Distinction of structural reorganisation and ligand binding in the T<==>R transition of insulin on the basis of allosteric models.
    Biol Chem Hoppe Seyler. 1993 Sep;374(9):877-85 PMID: 8267880
  13. Time-resolved detection of structural changes during the photocycle of spin-labeled bacteriorhodopsin.
    Science. 1994 Oct 7;266(5182):105-7 PMID: 7939627
  14. Interaction of alpha-crystallin with spin-labeled peptides.
    Biochemistry. 1995 Jan 17;34(2):509-16 PMID: 7819243
  15. Determination of the distance between two spin labels attached to a macromolecule.
    Proc Natl Acad Sci U S A. 1995 Aug 29;92(18):8239-43 PMID: 7667275
  16. Requirement of rigid-body motion of transmembrane helices for light activation of rhodopsin.
    Science. 1996 Nov 1;274(5288):768-70 PMID: 8864113
  17. Calculation of electron paramagnetic resonance spectra from Brownian dynamics trajectories: application to nitroxide side chains in proteins.
    Biophys J. 1996 Oct;71(4):2201-12 PMID: 8889196
  18. The structure of 2Zn pig insulin crystals at 1.5 A resolution.
    Philos Trans R Soc Lond B Biol Sci. 1988 Jul 6;319(1195):369-456 PMID: 2905485
Article Info
Journal
Biophysical journal
Abbr.
Biophys J
ISSN
0006-3495
Published
1997-12-00
Pages
3287-98
Language
English
Region
United States
NLM ID
0370626
PMCID
PMC1181230
Subset
IM
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com