Abstract
In an unprecedented finding, Davis et al. [Davis, R. E., Miller, S., Herrnstadt, C., Ghosh, S. S., Fahy, E., Shinobu, L. A., Galasko, D., Thal, L. J., Beal, M. F., Howell, N. & Parker, W. D., Jr. (1997) Proc. Natl. Acad. Sci. USA 94, 4526-4531] used an unusual DNA isolation method to show that healthy adults harbor a specific population of mutated mitochondrial cytochrome c oxidase (COX) genes that coexist with normal mtDNAs. They reported that this heteroplasmic population was present at a level of 10-15% in the blood of normal individuals and at a significantly higher level (20-30%) in patients with sporadic Alzheimer's disease. We provide compelling evidence that the DNA isolation method employed resulted in the coamplification of authentic mtDNA-encoded COX genes together with highly similar COX-like sequences embedded in nuclear DNA ("mtDNA pseudogenes"). We conclude that the observed heteroplasmy is an artifact.
MeSH Terms
Adult
Alzheimer Disease/genetics
Cell Nucleus/genetics
DNA, Mitochondrial/genetics
Humans
Polymerase Chain Reaction
Pseudogenes
Chemicals
DNA, Mitochondrial
Authors & Affiliations
7 authors, click to expand affiliations / ORCID
Hirano M
Department of Neurology, College of Physicians and Surgeons, Columbia University, New York, NY 10032, USA. mh29@columbia.edu
Shtilbans A
Mayeux R
Davidson M M
DiMauro S
Knowles J A
Schon E A
References (29)
29 references, click to expand
-
Mitochondrial DNA-like sequences in the human nuclear genome. Characterization and implications in the evolution of mitochondrial DNA.
J Mol Biol. 1985 Nov 20;186(2):257-66
PMID: 3003363
-
Expanding the functional human mitochondrial DNA database by the establishment of primate xenomitochondrial cybrids.
Proc Natl Acad Sci U S A. 1997 Aug 19;94(17):9131-5
PMID: 9256447
-
Deletions of mitochondrial DNA in Kearns-Sayre syndrome.
Neurology. 1988 Sep;38(9):1339-46
PMID: 3412580
-
Human cells lacking mtDNA: repopulation with exogenous mitochondria by complementation.
Science. 1989 Oct 27;246(4929):500-3
PMID: 2814477
-
Three separate mitochondrial DNA sequences are contiguous in human genomic DNA.
J Mol Biol. 1989 Dec 20;210(4):703-7
PMID: 2614844
-
Segregation of a missense mutation in the amyloid precursor protein gene with familial Alzheimer's disease.
Nature. 1991 Feb 21;349(6311):704-6
PMID: 1671712
-
mtDNA depletion with variable tissue expression: a novel genetic abnormality in mitochondrial diseases.
Am J Hum Genet. 1991 Mar;48(3):492-501
PMID: 1998336
-
The mitochondrial tRNA(Leu(UUR)) mutation in mitochondrial encephalomyopathy, lactic acidosis, and strokelike episodes (MELAS): genetic, biochemical, and morphological correlations in skeletal muscle.
Am J Hum Genet. 1992 May;50(5):934-49
PMID: 1315123
-
Brain cytochrome oxidase in Alzheimer's disease.
J Neurochem. 1992 Aug;59(2):776-9
PMID: 1321237
-
New evidence for the insertion of mitochondrial DNA into the human genome: significance for cancer and aging.
Mutat Res. 1992 Sep;275(3-6):227-35
PMID: 1383764
-
Intermediary metabolism disturbance in AD/SDAT and its relation to molecular events.
Prog Neuropsychopharmacol Biol Psychiatry. 1993 Mar;17(2):199-228
PMID: 8430215
-
Apolipoprotein E: high-avidity binding to beta-amyloid and increased frequency of type 4 allele in late-onset familial Alzheimer disease.
Proc Natl Acad Sci U S A. 1993 Mar 1;90(5):1977-81
PMID: 8446617
-
Electron transport chain defects in Alzheimer's disease brain.
Neurology. 1994 Jun;44(6):1090-6
PMID: 8208407
-
Cortical cytochrome oxidase activity is reduced in Alzheimer's disease.
J Neurochem. 1994 Dec;63(6):2179-84
PMID: 7964738
-
Cytochrome c oxidase in Alzheimer's disease brain: purification and characterization.
Neurology. 1995 Mar;45(3 Pt 1):482-6
PMID: 7898701
-
Cloning of a gene bearing missense mutations in early-onset familial Alzheimer's disease.
Nature. 1995 Jun 29;375(6534):754-60
PMID: 7596406
-
Candidate gene for the chromosome 1 familial Alzheimer's disease locus.
Science. 1995 Aug 18;269(5226):973-7
PMID: 7638622
-
Relative risk of Alzheimer disease and age-at-onset distributions, based on APOE genotypes among elderly African Americans, Caucasians, and Hispanics in New York City.
Am J Hum Genet. 1996 Mar;58(3):574-84
PMID: 8644717
-
Efficient and specific amplification of identified partial duplications of human mitochondrial DNA by long PCR.
Biochim Biophys Acta. 1996 Sep 11;1308(3):222-30
PMID: 8809114
-
Genetic factors in Alzheimer's disease: a review of recent advances.
Ann Neurol. 1996 Dec;40(6):829-40
PMID: 9007087
-
Maternal inheritance of human mitochondrial DNA.
Proc Natl Acad Sci U S A. 1980 Nov;77(11):6715-9
PMID: 6256757
-
Sequence and organization of the human mitochondrial genome.
Nature. 1981 Apr 9;290(5806):457-65
PMID: 7219534
-
Presence of mitochondrial-DNA-like sequences in the human nuclear DNA.
Gene. 1983 Nov;25(2-3):223-9
PMID: 6662364
-
Structure of the human phosphoglycerate kinase gene and the intron-mediated evolution and dispersal of the nucleotide-binding domain.
Proc Natl Acad Sci U S A. 1985 Oct;82(20):6965-9
PMID: 2995995
-
Mutations in mitochondrial cytochrome c oxidase genes segregate with late-onset Alzheimer disease.
Proc Natl Acad Sci U S A. 1997 Apr 29;94(9):4526-31
PMID: 9114023
-
Multiplex fluorescence-based primer extension method for quantitative mutation analysis of mitochondrial DNA and its diagnostic application for Alzheimer's disease.
Nucleic Acids Res. 1997 Aug 1;25(15):3102-9
PMID: 9224611
-
Mitochondrial DNA mutations and pathogenesis.
J Bioenerg Biomembr. 1997 Apr;29(2):131-49
PMID: 9239539
-
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.
Nucleic Acids Res. 1997 Sep 1;25(17):3389-402
PMID: 9254694
-
Mitochondrial function in brain tissue in primary degenerative dementia.
Brain Res. 1987 Dec 8;436(1):30-8
PMID: 3690351