Home LiteratureArticle Details
PMID: 9166401 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, P.H.S.

Nup84, a novel nucleoporin that is associated with CAN/Nup214 on the cytoplasmic face of the nuclear pore complex.

The Journal of cell biology ·Vol. 137 ·No. 5 ·1997-06-02 ·Pages 989-1000

Bastos R, Ribas de Pouplana L, Enarson M, Bodoor K, Burke B

Abstract

The short filaments extending from the cytoplasmic face of nuclear pore complexes are thought to contain docking sites for nuclear import substrates. One component of these filaments is the large O-linked glycoprotein CAN/Nup214. Immunoprecipitation studies carried out under nondenaturing conditions, and using a variety of antibodies, reveal a novel nonglycosylated nucleoporin, Nup84, that is tightly associated with CAN/Nup214. Consistent with such an association, Nup84 is found to be exposed on the cytoplasmic face of the nuclear pore complex. cDNA sequence analyses indicate that Nup84 contains neither the GLFG nor the XFXFG repeats that are a characteristic of a number of other nuclear pore complex proteins. Secondary structure predictions, however, suggest that Nup84 contains a coiled-coil COOH-terminal domain, a conclusion supported by the observation of significant sequence similarity between this region of the molecule and various members of the tropomyosin family. Mutagenesis and expression studies indicate that the putative coiled-coil domain is required for association with the cytoplasmic face of the nuclear pore complex, whereas it is the NH2-terminal region of Nup84 that contains the site of interaction with CAN/Nup214. These findings suggest a model in which Nup84 may function in the attachment of CAN/Nup214 to the central framework of the nuclear pore complex. In this way, Nup84 could play a central role in the organization of the interface between the pore complex and the cytoplasm.

MeSH Terms
Amino Acid Sequence Animals Antibodies, Monoclonal Antibody Specificity Blotting, Western Cloning, Molecular Cricetinae Cytoplasm/chemistry DNA, Complementary Fluorescent Antibody Technique, Indirect Gene Expression/physiology HeLa Cells Humans Kidney/cytology Liver/chemistry Molecular Sequence Data Nuclear Envelope/chemistry Nuclear Pore Complex Proteins Nuclear Proteins/genetics,immunology,isolation & purification,metabolism Protein Binding/physiology Rabbits Rats Saccharomyces cerevisiae Proteins
Chemicals
Antibodies, Monoclonal DNA, Complementary NUP214 protein, human NUP84 protein, S cerevisiae Nuclear Pore Complex Proteins Nuclear Proteins Saccharomyces cerevisiae Proteins
Authors & Affiliations
5 authors, click to expand affiliations / ORCID
Bastos R
Department of Cell Biology, Harvard Medical School, Boston, Massachusetts 02115, USA.
Ribas de Pouplana L
Enarson M
Bodoor K
Burke B
References (56)
56 references, click to expand
  1. Nuclear pore complex proteins.
    Int Rev Cytol. 1995;162B:257-302 PMID: 8557489
  2. Relocation of the carboxyterminal part of CAN from the nuclear envelope to the nucleus as a result of leukemia-specific chromosome rearrangements.
    Oncogene. 1995 May 4;10(9):1739-48 PMID: 7753551
  3. Mammalian karyopherin alpha 1 beta and alpha 2 beta heterodimers: alpha 1 or alpha 2 subunit binds nuclear localization signal and beta subunit interacts with peptide repeat-containing nucleoporins.
    Proc Natl Acad Sci U S A. 1995 Jul 3;92(14):6532-6 PMID: 7604027
  4. Reconstitution of biochemically altered nuclear pores: transport can be eliminated and restored.
    Cell. 1990 Jan 12;60(1):17-29 PMID: 2295087
  5. Cleavage of structural proteins during the assembly of the head of bacteriophage T4.
    Nature. 1970 Aug 15;227(5259):680-5 PMID: 5432063
  6. Pores for thought: nuclear pore complex proteins.
    Trends Cell Biol. 1994 Oct;4(10):357-65 PMID: 14731624
  7. Internal amino acid sequence analysis of proteins separated by one- or two-dimensional gel electrophoresis after in situ protease digestion on nitrocellulose.
    Proc Natl Acad Sci U S A. 1987 Oct;84(20):6970-4 PMID: 3313383
  8. Antibody-induced linkages of plasma membrane proteins to intracellular actomyosin-containing filaments in cultured fibroblasts.
    Proc Natl Acad Sci U S A. 1977 Dec;74(12):5584-8 PMID: 146200
  9. Purification and characterization of a nuclear pore glycoprotein complex containing p62.
    J Biochem. 1993 Mar;113(3):377-82 PMID: 8486610
  10. Protein import into nuclei: association and dissociation reactions involving transport substrate, transport factors, and nucleoporins.
    Cell. 1995 Dec 1;83(5):683-92 PMID: 8521485
  11. Structural plasticity of the nuclear pore complex.
    J Mol Biol. 1995 Apr 28;248(2):273-93 PMID: 7739040
  12. Three novel brain tropomyosin isoforms are expressed from the rat alpha-tropomyosin gene through the use of alternative promoters and alternative RNA processing.
    Mol Cell Biol. 1990 Apr;10(4):1729-42 PMID: 2320008
  13. Interactions and three-dimensional localization of a group of nuclear pore complex proteins.
    J Cell Biol. 1994 Aug;126(3):603-17 PMID: 8045926
  14. Macromolecular interactions in the nucleoporin p62 complex of rat nuclear pores: binding of nucleoporin p54 to the rod domain of p62.
    J Cell Biol. 1995 Feb;128(3):251-61 PMID: 7531196
  15. Monoclonal antibodies identify a group of nuclear pore complex glycoproteins.
    J Cell Biol. 1987 May;104(5):1143-56 PMID: 2437126
  16. The human homologue of yeast CRM1 is in a dynamic subcomplex with CAN/Nup214 and a novel nuclear pore component Nup88.
    EMBO J. 1997 Feb 17;16(4):807-16 PMID: 9049309
  17. Can, a putative oncogene associated with myeloid leukemogenesis, may be activated by fusion of its 3' half to different genes: characterization of the set gene.
    Mol Cell Biol. 1992 Aug;12(8):3346-55 PMID: 1630450
  18. GTP hydrolysis by Ran occurs at the nuclear pore complex in an early step of protein import.
    J Cell Biol. 1995 Nov;131(3):571-81 PMID: 7593180
  19. Improved prediction of protein secondary structure by use of sequence profiles and neural networks.
    Proc Natl Acad Sci U S A. 1993 Aug 15;90(16):7558-62 PMID: 8356056
  20. Synthetic oligonucleotide probes deduced from amino acid sequence data. Theoretical and practical considerations.
    J Mol Biol. 1985 May 5;183(1):1-12 PMID: 4009718
  21. Identification and characterization of a nuclear pore complex protein.
    Cell. 1986 Jun 6;45(5):699-709 PMID: 3518946
  22. Two signals mediate hormone-dependent nuclear localization of the glucocorticoid receptor.
    EMBO J. 1987 Nov;6(11):3333-40 PMID: 3123217
  23. The peptide repeat domain of nucleoporin Nup98 functions as a docking site in transport across the nuclear pore complex.
    Cell. 1995 Apr 21;81(2):215-22 PMID: 7736573
  24. NUP82 is an essential yeast nucleoporin required for poly(A)+ RNA export.
    J Cell Biol. 1995 Sep;130(6):1275-81 PMID: 7559751
  25. A complex of nuclear pore proteins required for pore function.
    J Cell Biol. 1991 Jul;114(1):169-83 PMID: 2050741
  26. Structural analysis of the p62 complex, an assembly of O-linked glycoproteins that localizes near the central gated channel of the nuclear pore complex.
    Mol Biol Cell. 1995 Nov;6(11):1591-603 PMID: 8589458
  27. Structural and functional organization of the nuclear envelope.
    Curr Opin Cell Biol. 1995 Jun;7(3):301-9 PMID: 7662358
  28. Database of homology-derived protein structures and the structural meaning of sequence alignment.
    Proteins. 1991;9(1):56-68 PMID: 2017436
  29. Purification of NSP1 reveals complex formation with 'GLFG' nucleoporins and a novel nuclear pore protein NIC96.
    EMBO J. 1993 Aug;12(8):3061-71 PMID: 7688296
  30. Oligodeoxyribonucleotide ligation to single-stranded cDNAs: a new tool for cloning 5' ends of mRNAs and for constructing cDNA libraries by in vitro amplification.
    Nucleic Acids Res. 1991 Oct 11;19(19):5227-32 PMID: 1923806
  31. Basic local alignment search tool.
    J Mol Biol. 1990 Oct 5;215(3):403-10 PMID: 2231712
  32. Tropomyosin crystal structure and muscle regulation.
    J Mol Biol. 1986 Nov 5;192(1):111-31 PMID: 3820299
  33. Nuclei from rat liver: isolation method that combines purity with high yield.
    Science. 1966 Dec 30;154(3757):1662-5 PMID: 5924199
  34. Functional interaction of Nic96p with a core nucleoporin complex consisting of Nsp1p, Nup49p and a novel protein Nup57p.
    EMBO J. 1995 Jan 3;14(1):76-87 PMID: 7828598
  35. Nuclear protein import in permeabilized mammalian cells requires soluble cytoplasmic factors.
    J Cell Biol. 1990 Sep;111(3):807-16 PMID: 2391365
  36. Architecture of the Xenopus nuclear pore complex revealed by three-dimensional cryo-electron microscopy.
    J Cell Biol. 1993 Jul;122(1):1-19 PMID: 8314837
  37. Sequential binding of import ligands to distinct nucleopore regions during their nuclear import.
    Science. 1996 Sep 20;273(5282):1729-32 PMID: 8781239
  38. The human CAN protein, a putative oncogene product associated with myeloid leukemogenesis, is a nuclear pore complex protein that faces the cytoplasm.
    Proc Natl Acad Sci U S A. 1994 Feb 15;91(4):1519-23 PMID: 8108440
  39. Organization and modulation of nuclear lamina structure.
    J Cell Sci Suppl. 1984;1:137-60 PMID: 6597817
  40. A modified procedure for the isolation of a pore complex-lamina fraction from rat liver nuclei.
    J Cell Biol. 1976 Sep;70(3):581-91 PMID: 986398
  41. Targeting and function in mRNA export of nuclear pore complex protein Nup153.
    J Cell Biol. 1996 Sep;134(5):1141-56 PMID: 8794857
  42. Mechanisms of nuclear protein import.
    Curr Opin Cell Biol. 1995 Jun;7(3):310-8 PMID: 7662359
  43. Nuclear protein migration involves two steps: rapid binding at the nuclear envelope followed by slower translocation through nuclear pores.
    Cell. 1988 Mar 11;52(5):655-64 PMID: 3125984
  44. An analysis of 5'-noncoding sequences from 699 vertebrate messenger RNAs.
    Nucleic Acids Res. 1987 Oct 26;15(20):8125-48 PMID: 3313277
  45. Role of different domains in the self-association of rat nucleoporin p62.
    J Cell Sci. 1994 Feb;107 ( Pt 2):631-8 PMID: 8207085
  46. On the cell-free association of lamins A and C with metaphase chromosomes.
    Exp Cell Res. 1990 Jan;186(1):169-76 PMID: 2298234
  47. A monoclonal antibody against a 135-K Golgi membrane protein.
    EMBO J. 1982;1(12):1621-8 PMID: 7188254
  48. Correlation between structure and mass distribution of the nuclear pore complex and of distinct pore complex components.
    J Cell Biol. 1990 Apr;110(4):883-94 PMID: 2324201
  49. G2 arrest and impaired nucleocytoplasmic transport in mouse embryos lacking the proto-oncogene CAN/Nup214.
    EMBO J. 1996 Oct 15;15(20):5574-83 PMID: 8896451
  50. Nuclear pore complex contains a family of glycoproteins that includes p62: glycosylation through a previously unidentified cellular pathway.
    Proc Natl Acad Sci U S A. 1987 Nov;84(21):7552-6 PMID: 3313397
  51. Role of the nuclear transport factor p10 in nuclear import.
    Science. 1996 Apr 5;272(5258):120-2 PMID: 8600522
  52. "Western blotting": electrophoretic transfer of proteins from sodium dodecyl sulfate--polyacrylamide gels to unmodified nitrocellulose and radiographic detection with antibody and radioiodinated protein A.
    Anal Biochem. 1981 Apr;112(2):195-203 PMID: 6266278
  53. Identification of NTF2, a cytosolic factor for nuclear import that interacts with nuclear pore complex protein p62.
    J Cell Biol. 1995 May;129(4):925-37 PMID: 7744965
  54. A novel nuclear pore protein Nup82p which specifically binds to a fraction of Nsp1p.
    J Cell Biol. 1995 Sep;130(6):1263-73 PMID: 7559750
  55. Molecular and functional characterization of the p62 complex, an assembly of nuclear pore complex glycoproteins.
    J Cell Biol. 1996 Aug;134(3):589-601 PMID: 8707840
  56. Architecture and design of the nuclear pore complex.
    Cell. 1992 Jun 26;69(7):1133-41 PMID: 1617726
Article Info
Journal
The Journal of cell biology
Abbr.
J Cell Biol
ISSN
0021-9525
Published
1997-06-02
Pages
989-1000
Language
English
Region
United States
NLM ID
0375356
PMCID
PMC2136229
Subset
IM
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com