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PMID: 9016518 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Update of the viroid and viroid-like sequence database: addition of a hepatitis delta virus RNA section.

Nucleic acids research ·Vol. 25 ·No. 1 ·1997-01-01 ·Pages 123-5

Lafontaine D, Mercure S, Perreault JP

Abstract

Recently, we developed and made available an online database that includes all the reported (to our knowledge) viroid and viroid-like RNA sequences [Bussire,F., Lafontaine,D. and Perreault,J.-P. (1996)Nucleic Acids Res.24, 1793-1798]. We report here an update of this catalogue which includes the addition of a new section devoted to human hepatitis delta virus (vHDV) sequences. This new section comprises all available vHDV sequences, irrespective of their completeness, which have been either published or were available from nucleic acid libraries. Additional structural characteristics of the vHDV genome, such as the positions of the self-catalytic domains, the antigen open reading frames, etc., are also included. The catalogue is available on the World Wide Web (see text) in a user-friendly form. It should provide an excellent reference point for further molecular studies of these small circular pathogenic RNAs.

MeSH Terms
Base Sequence Databases, Factual Hepatitis Delta Virus/genetics Humans RNA, Viral/genetics Viroids/genetics
Chemicals
RNA, Viral
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Lafontaine D
Département de Biochimie, Faculté de Médecine, Université de Sherbrooke, Sherbrooke, Québec, J1H 5N4, Canada.
Mercure S
Perreault J P
References (4)
4 references, click to expand
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  2. Compilation and analysis of viroid and viroid-like RNA sequences.
    Nucleic Acids Res. 1996 May 15;24(10):1793-8 PMID: 8657556
  3. The molecular biology of hepatitis delta virus.
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  4. A genotype of hepatitis D virus that occurs in northern South America.
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Article Info
Journal
Nucleic acids research
Abbr.
Nucleic Acids Res
ISSN
0305-1048
Published
1997-01-01
Pages
123-5
Language
English
Region
England
NLM ID
0411011
PMCID
PMC146369
Subset
IM
Grants
Canadian Institutes of Health Research · 12673 · Canada
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