Abstract
One of the most remarkable structural aspects of Scapharca dimeric hemoglobin is the disruption of a very well-ordered water cluster at the subunit interface upon ligand binding. We have explored the role of these crystallographically observed water molecules by site-directed mutagenesis and osmotic stress techniques. The isosteric mutation of Thr-72-->Val in the interface increases oxygen affinity more than 40-fold with a surprising enhancement of cooperativity. The only significant structural effect of this mutation is to destabilize two ordered water molecules in the deoxy interface. Wild-type Scapharca hemoglobin is strongly sensitive to osmotic conditions. Upon addition of glycerol, striking changes in Raman spectrum of the deoxy form are observed that indicate a transition toward the liganded form. Increased osmotic pressure, which lowers the oxygen affinity in human hemoglobin, raises the oxygen affinity of Scapharca hemoglobin regardless of whether the solute is glycerol, glucose, or sucrose. Analysis of these results provides an estimate of six water molecules lost upon oxygen binding to the dimer, in good agreement with eight predicted from crystal structures. These experiments suggest that the observed cluster of interfacial water molecules plays a crucial role in communication between subunits.
MeSH Terms
Allosteric Regulation
Animals
Bivalvia
Dimerization
Hemoglobins/chemistry,genetics
Mutagenesis, Site-Directed
Water/chemistry
Chemicals
Hemoglobins
Water
dimeric hemoglobin, Scapharca inaequivalvis
Authors & Affiliations
5 authors, click to expand affiliations / ORCID
Royer W E
Program in Molecular Medicine, University of Massachusetts Medical Center, Worcester 01605, USA.
Pardanani A
Gibson Q H
Peterson E S
Friedman J M
References (26)
26 references, click to expand
-
Kinetics of ligand binding and quaternary conformational change in the homodimeric hemoglobin from Scapharca inaequivalvis.
J Biol Chem. 1984 Jun 10;259(11):6730-8
PMID: 6725269
-
A single mutation (Thr72-->Ile) at the subunit interface is crucial for the functional properties of the homodimeric co-operative haemoglobin from Scapharca inaequivalvis.
J Mol Biol. 1995 May 19;248(5):910-7
PMID: 7760332
-
Properties of the T state of human oxyhemoglobin studies by laser photolysis.
J Biol Chem. 1977 Nov 10;252(21):7538-47
PMID: 914826
-
Heme-heme interactions in a homodimeric cooperative hemoglobin. Evidence from transient Raman scattering.
J Biol Chem. 1993 Mar 15;268(8):5719-23
PMID: 8449934
-
Dimeric and tetrameric hemoglobins from the mollusc Scapharca inaequivalvis. Structural and functional properties.
J Mol Biol. 1981 Nov 5;152(3):577-92
PMID: 7328663
-
ON THE NATURE OF ALLOSTERIC TRANSITIONS: A PLAUSIBLE MODEL.
J Mol Biol. 1965 May;12:88-118
PMID: 14343300
-
Macromolecules and water: probing with osmotic stress.
Methods Enzymol. 1995;259:43-94
PMID: 8538466
-
Hydrostatic and osmotic pressure as tools to study macromolecular recognition.
Methods Enzymol. 1995;259:395-427
PMID: 8538464
-
The water effect on allosteric regulation of hemoglobin probed in water/glucose and water/glycine solutions.
J Biol Chem. 1996 Mar 1;271(9):4895-9
PMID: 8617761
-
Bacterial expression of Scapharca dimeric hemoglobin: a simple model system for investigating protein cooperatively.
Protein Eng. 1995 Jun;8(6):593-9
PMID: 8532684
-
Water structure in cubic insulin crystals.
Proc Natl Acad Sci U S A. 1991 Jan 15;88(2):622-6
PMID: 1988957
-
Measuring water potential (activity) from free water to oven dryness.
Plant Physiol. 1981 Dec;68(6):1218-21
PMID: 16662081
-
Protein solvation in allosteric regulation: a water effect on hemoglobin.
Science. 1992 May 1;256(5057):655-9
PMID: 1585178
-
Substrate specificity and affinity of a protein modulated by bound water molecules.
Nature. 1989 Aug 3;340(6232):404-7
PMID: 2818726
-
Bound water molecules and conformational stabilization help mediate an antigen-antibody association.
Proc Natl Acad Sci U S A. 1994 Feb 1;91(3):1089-93
PMID: 8302837
-
Structural basis of the allosteric behaviour of phosphofructokinase.
Nature. 1990 Jan 11;343(6254):140-5
PMID: 2136935
-
Crystal structure of oxygenated Scapharca dimeric hemoglobin at 1.7-A resolution.
J Biol Chem. 1994 Oct 14;269(41):25259-67
PMID: 7929217
-
The contribution of the alpha and beta chains to the kinetics of oxygen binding to and dissociation from hemoglobin.
Proc Natl Acad Sci U S A. 1973 Jan;70(1):1-4
PMID: 4509652
-
LINKED FUNCTIONS AND RECIPROCAL EFFECTS IN HEMOGLOBIN: A SECOND LOOK.
Adv Protein Chem. 1964;19:223-86
PMID: 14268785
-
Mutagenesis supports water mediated recognition in the trp repressor-operator system.
EMBO J. 1994 Jan 15;13(2):367-72
PMID: 8313881
-
Thermodynamic properties of oxygen equilibria of dimeric and tetrameric hemoglobins from Scapharca inaequivalvis.
J Mol Biol. 1983 Nov 15;170(4):1009-18
PMID: 6644811
-
The hydrolytic water molecule in trypsin, revealed by time-resolved Laue crystallography.
Science. 1993 Jan 29;259(5095):669-73
PMID: 8430314
-
An enzymic reduction system for metmyoglobin and methemoglobin, and its application to functional studies of oxygen carriers.
Biochim Biophys Acta. 1973 Jun 15;310(2):309-16
PMID: 4146292
-
Studies on the oxygen and carbon monoxide equilibria of human myoglobin.
Arch Biochem Biophys. 1958 Oct;77(2):478-92
PMID: 13584010
-
High-resolution crystallographic analysis of a co-operative dimeric hemoglobin.
J Mol Biol. 1994 Jan 14;235(2):657-81
PMID: 8289287
-
Ligand binding and conformation change in the dimeric hemoglobin of the clam Scapharca inaequivalvis.
J Biol Chem. 1993 Mar 15;268(8):5711-8
PMID: 8449933