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PMID: 8954784 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

The tuberin (TSC2), autosomal dominant polycystic kidney disease (PKD1), and somatostatin type V receptor (SSTR5) genes form a synteny group in the Fugu genome.

Genomics ·Vol. 38 ·No. 1 ·1996-11-15 ·Pages 84-6

Sandford R, Sgotto B, Burn T, Brenner S

Abstract

The tuberous sclerosis 2 (TSC2) and polycystic kidney disease 1 (PKD1) genes are adjacent on human chromosome 16p13.3 and form part of a conserved synteny group with mouse chromosome 17. We have determined that the PKD1 gene is evolutionarily conserved, single copy, and linked to TSC2 in the Fugu genome. A short cosmid contig has been identified containing both genes based on hybridization, exon trapping, and random sequence data. In addition sequences homologous to the somatostatin type V receptor (SSTR5) were identified 5' to PKD1, defining a larger syntenic region, as this gene has also been mapped to human chromosome 16p13.3. As in mammalian genomes, the Fugu TSC2 and PKD1 genes are adjacent in a tail-to-tail orientation.

MeSH Terms
Animals Fishes, Poisonous/genetics Genes, Dominant Genome Humans Mice Proteins/genetics Receptors, Somatostatin/genetics Repressor Proteins/genetics TRPP Cation Channels Tuberous Sclerosis Complex 2 Protein Tumor Suppressor Proteins
Chemicals
Proteins Receptors, Somatostatin Repressor Proteins TRPP Cation Channels TSC2 protein, human Tsc2 protein, mouse Tuberous Sclerosis Complex 2 Protein Tumor Suppressor Proteins polycystic kidney disease 1 protein somatostatin receptor 5
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Sandford R
Department of Medicine, Addenbrookes Hospital, Cambridge, England, United Kingdom. rsandfor@med.cam.ac.uk
Sgotto B
Burn T
Brenner S
Article Info
Journal
Genomics
Abbr.
Genomics
ISSN
0888-7543
Published
1996-11-15
Pages
84-6
Language
English
Region
United States
NLM ID
8800135
Subset
IM
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