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PMID: 8874025 Published · ppublish English Journal Article

23Na NMR study of the effect of organic osmolytes on DNA counterion atmosphere.

Biophysical journal ·Vol. 71 ·No. 3 ·1996-09-00 ·Pages 1519-29

Flock S, Labarbe R, Houssier C

Abstract

The effect of different organic osmolytes on the DNA counterion condensation layer has been investigated by 23Na NMR relaxation measurements. The zwitterionic compounds glycine, beta-alanine, 4-aminobutyric acid, and 6-aminocaproic acid have shown an increasing capacity to decrease the amount of sodium ions in the vicinity of the macromolecule. The experimental data have been correlated with the dielectric constant increase in their corresponding solutions and have been compared with the prediction of counterion condensation theory. Polyols (sorbitol and mannitol) did not display the same effect. These compounds largely increase the relaxation rate of sodium ions in the proximity of DNA, unlike the zwitterionic compounds. This probably results from a perturbation of the water dynamic around the macromolecule, of the primary or secondary hydration shell of the sodium nuclei involved, or both.

MeSH Terms
Alcohols Animals Biophysical Phenomena Biophysics Cattle DNA/chemistry Electrochemistry Hexamethonium In Vitro Techniques Ions Magnetic Resonance Spectroscopy Osmolar Concentration Sodium/chemistry Solutions
Chemicals
Alcohols Ions Solutions Hexamethonium DNA Sodium
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Flock S
Laboratoire de Chimie Macromoléculaire et Chimie Physique, Université de Liege, Belgium.
Labarbe R
Houssier C
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Article Info
Journal
Biophysical journal
Abbr.
Biophys J
ISSN
0006-3495
Published
1996-09-00
Pages
1519-29
Language
English
Region
United States
NLM ID
0370626
PMCID
PMC1233618
Subset
IM
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