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PMID: 8688421 Published · ppublish English Comparative Study Journal Article Research Support, U.S. Gov't, P.H.S.

A rapid screen of active site mutants in glycinamide ribonucleotide transformylase.

Biochemistry ·Vol. 35 ·No. 27 ·1996-07-09 ·Pages 8855-62

Warren MS, Marolewski AE, Benkovic SJ

Abstract

Specific and saturation site-directed mutageneses have been used to alter each polar residue within 6 A of the catalytic center of glycinamide ribonucleotide transformylase (EC 2.1.2.2). These mutants were rapidly screened for catalytic activity using functional complementation of auxotrophic cells. This screen allows a rapid qualitative estimate of enzyme activity for each of these mutants. These results have shown that none of the polar residues close to the catalytic center of the enzyme are irreplaceable, although several are important for full catalytic activity, namely, Asn106, His108, Ser135, and Asp144. A mechanism is proposed in which a fixed water molecule mediates the required proton transfers between substrate and cofactor, while the formyl group is transferred from 10-formyltetrahydrofolate by direct nucleophilic attack by the amine of glycinamide ribonucleotide. The active site polar residues may act to alter the pKa values of the attacking and leaving amino groups within a putative tetrahedral intermediate in order to facilitate the transfer of the formyl group.

MeSH Terms
Acyltransferases/genetics,metabolism Binding Sites/genetics Catalysis Escherichia coli/enzymology,genetics,growth & development Genetic Complementation Test Hydrogen Bonding Hydroxymethyl and Formyl Transferases Models, Chemical Mutagenesis, Site-Directed Mutation Phosphoribosylglycinamide Formyltransferase Protein Engineering Selection, Genetic Sequence Analysis, DNA Structure-Activity Relationship
Chemicals
Hydroxymethyl and Formyl Transferases Phosphoribosylglycinamide Formyltransferase Acyltransferases
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Warren M S
Department of Chemistry, Davey Laboratory, Pennsylvania State University, University park 16802, USA.
Marolewski A E
Benkovic S J
Article Info
Journal
Biochemistry
Abbr.
Biochemistry
ISSN
0006-2960
Published
1996-07-09
Pages
8855-62
Language
English
Region
United States
NLM ID
0370623
Subset
IM
Grants
NIGMS NIH HHS · GM24129 · United States
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