Home LiteratureArticle Details
PMID: 8483449 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Molecular structure and genetic regulation of SFA, a gene responsible for resistance to formaldehyde in Saccharomyces cerevisiae, and characterization of its protein product.

Molecular & general genetics : MGG ·Vol. 237 ·No. 3 ·1993-03-00 ·Pages 351-8

Wehner EP, Rao E, Brendel M

Abstract

A 3.7 kb DNA fragment of yeast chromosome IV has been sequenced that contains the SFA gene which, when present on a multi-copy plasmid in Saccharomyces cerevisiae, confers hyper-resistance to formaldehyde. The open reading frame of SFA is 1158 bp in size and encodes a polypeptide of 386 amino acids. The predicted protein shows strong homologies to several mammalian alcohol dehydrogenases and contains a sequence characteristic of binding sites for NAD. Overexpression of the SFA gene leads to enhanced consumption of formaldehyde, which is most probably the reason for the observed hyper-resistance phenotype. In sfa::LEU2 disruption mutants, sensitivity to formaldehyde is correlated with reduced degradation of the chemical. The SFA gene shares an 868 bp divergent promoter with UGX2 a gene of yet unknown function. Promoter deletion studies with a SFA promoter-lacZ gene fusion construct revealed negative interference on expression of SFA by upstream sequences. The upstream region between positions -145 and -172 is totally or partially responsible for control of inducibility of SFA by chemicals such as formaldehyde (FA), ethanol and methyl methanesulphonate. The 41 kDa SFA-encoded protein was purified from a hyper-resistant transformant; it oxidizes long-chain alcohols and, in the presence of glutathione, is able to oxidize FA. SFA is predicted to code for a long-chain alcohol dehydrogenase (glutathione-dependent formaldehyde dehydrogenase) of the yeast S. cerevisiae.

Related Genes
SFA
MeSH Terms
Alcohol Dehydrogenase/genetics Amino Acid Sequence Base Sequence DNA, Fungal Drug Resistance, Microbial/genetics Electrophoresis, Polyacrylamide Gel Formaldehyde/metabolism,pharmacology Fungal Proteins/genetics Gene Expression Regulation, Fungal Genes, Fungal Glutathione/metabolism Molecular Sequence Data Open Reading Frames Oxidation-Reduction Restriction Mapping Saccharomyces cerevisiae/enzymology,genetics
Chemicals
DNA, Fungal Fungal Proteins Formaldehyde Alcohol Dehydrogenase Glutathione
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Wehner E P
Institut für Mikrobiologie, J. W. Goethe-Universität, Frankfurt am Main, FRG.
Rao E
Brendel M
References (32)
32 references, click to expand
  1. Formaldehyde metabolism by Escherichia coli. Detection by in vivo 13C NMR spectroscopy of S-(hydroxymethyl)glutathione as a transient intracellular intermediate.
    Biochemistry. 1986 Aug 12;25(16):4504-7 PMID: 3533139
  2. Formaldehyde dehydrogenase from human liver. Purification, properties, and evidence for the formation of glutathione thiol esters by the enzyme.
    J Biol Chem. 1974 Dec 10;249(23):7653-63 PMID: 4373474
  3. Evidence for the identity of glutathione-dependent formaldehyde dehydrogenase and class III alcohol dehydrogenase.
    FEBS Lett. 1989 Oct 23;257(1):105-9 PMID: 2806555
  4. Yeast/E. coli shuttle vectors with multiple unique restriction sites.
    Yeast. 1986 Sep;2(3):163-7 PMID: 3333305
  5. A one-tube plasmid DNA mini-preparation suitable for sequencing.
    Nucleic Acids Res. 1988 Oct 25;16(20):9878 PMID: 3186460
  6. Molecular characterization of the two genes SNQ and SFA that confer hyperresistance to 4-nitroquinoline-N-oxide and formaldehyde in Saccharomyces cerevisiae.
    Curr Genet. 1989 Aug;16(2):65-74 PMID: 2557161
  7. A simple method for displaying the hydropathic character of a protein.
    J Mol Biol. 1982 May 5;157(1):105-32 PMID: 7108955
  8. Physical and enzymatic properties of a class III isozyme of human liver alcohol dehydrogenase: chi-ADH.
    Biochemistry. 1984 May 8;23(10):2193-9 PMID: 6375718
  9. Rat liver alcohol dehydrogenase of class III. Primary structure, functional consequences and relationships to other alcohol dehydrogenases.
    Eur J Biochem. 1988 Feb 15;172(1):73-83 PMID: 3278908
  10. Hyperresistance to DNA damaging agents in yeast.
    Curr Genet. 1986;11(3):211-5 PMID: 3129200
  11. An optimized freeze-squeeze method for the recovery of DNA fragments from agarose gels.
    Anal Biochem. 1983 Jul 1;132(1):14-9 PMID: 6312834
  12. A system of shuttle vectors and yeast host strains designed for efficient manipulation of DNA in Saccharomyces cerevisiae.
    Genetics. 1989 May;122(1):19-27 PMID: 2659436
  13. Class III human liver alcohol dehydrogenase: a novel structural type equidistantly related to the class I and class II enzymes.
    Biochemistry. 1988 Feb 23;27(4):1132-40 PMID: 3365377
  14. Prolonged incubation in calcium chloride improves the competence of Escherichia coli cells.
    Gene. 1979 May;6(1):23-8 PMID: 383576
  15. The primary structure of yeast alcohol dehydrogenase.
    Eur J Biochem. 1977 Feb;72(3):425-42 PMID: 320000
  16. Formaldehyde dehydrogenase from bakers' yeast.
    J Biol Chem. 1962 Oct;237:3279-81 PMID: 13974804
  17. Rapid and sensitive protein similarity searches.
    Science. 1985 Mar 22;227(4693):1435-41 PMID: 2983426
  18. Conservation of high efficiency promoter sequences in Saccharomyces cerevisiae.
    Nucleic Acids Res. 1982 Apr 24;10(8):2625-37 PMID: 6281737
  19. DNA sequencing with chain-terminating inhibitors.
    Proc Natl Acad Sci U S A. 1977 Dec;74(12):5463-7 PMID: 271968
  20. Mutagenesis by cytostatic alkylating agents in yeast strains of differing repair capacities.
    Genetics. 1979 May;92(1):83-97 PMID: 387518
  21. Genetic characterization of hyperresistance to formaldehyde and 4-nitroquinoline-N-oxide in the yeast Saccharomyces cerevisiae.
    Mol Gen Genet. 1988 Feb;211(2):260-5 PMID: 3127660
  22. Human liver class III alcohol and glutathione dependent formaldehyde dehydrogenase are the same enzyme.
    Biochem Biophys Res Commun. 1991 Aug 15;178(3):1371-7 PMID: 1872853
  23. Cloning and sequencing of cDNA encoding the complete mouse liver alcohol dehydrogenase.
    Proc Natl Acad Sci U S A. 1985 Apr;82(8):2262-6 PMID: 3157987
  24. Structure of the class II enzyme of human liver alcohol dehydrogenase: combined cDNA and protein sequence determination of the pi subunit.
    Biochemistry. 1987 Apr 7;26(7):1926-32 PMID: 3036213
  25. Complete amino acid sequence of rat liver alcohol dehydrogenase deduced from the cDNA sequence.
    Gene. 1986;48(2-3):287-91 PMID: 2881847
  26. A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding.
    Anal Biochem. 1976 May 7;72:248-54 PMID: 942051
  27. Isolation of yeast mutants sensitive to the bifunctional alkylating agent nitrogen mustard.
    Mol Gen Genet. 1981;181(3):346-51 PMID: 7017347
  28. Purification, characterization, and partial sequence of the glutathione-dependent formaldehyde dehydrogenase from Escherichia coli: a class III alcohol dehydrogenase.
    Biochemistry. 1992 Jan 21;31(2):475-81 PMID: 1731906
  29. Formation and fate of cross-links induced by polyfunctional anticancer drugs in yeast.
    Mol Gen Genet. 1979 Oct 2;176(1):41-52 PMID: 396449
  30. Divergent promoters, a common form of gene organization.
    Microbiol Rev. 1988 Sep;52(3):318-26 PMID: 3054465
  31. Prediction of the occurrence of the ADP-binding beta alpha beta-fold in proteins, using an amino acid sequence fingerprint.
    J Mol Biol. 1986 Jan 5;187(1):101-7 PMID: 3959077
  32. Transformation of intact yeast cells treated with alkali cations.
    J Bacteriol. 1983 Jan;153(1):163-8 PMID: 6336730
Article Info
Journal
Molecular & general genetics : MGG
Abbr.
Mol Gen Genet
ISSN
0026-8925
Published
1993-03-00
Pages
351-8
Language
English
Region
Germany
NLM ID
0125036
Subset
IM
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com