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PMID: 8468299 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, Non-P.H.S. Research Support, U.S. Gov't, P.H.S.

The Rhodobacter capsulatus chlorin reductase-encoding locus, bchA, consists of three genes, bchX, bchY, and bchZ.

Journal of bacteriology ·Vol. 175 ·No. 8 ·1993-04-00 ·Pages 2407-13

Burke DH, Alberti M, Hearst JE

Abstract

The bchA locus of Rhodobacter capsulatus codes for the chlorin reductase enzyme in the bacteriochlorophyll synthesis pathway. Previous work has suggested that this locus might encompass a single gene. We have sequenced the bchA locus and found it to contain three coding segments, which we designate bchX, bchY, and bchZ. Each coding segment contains its own translational initiation sequence and follows codon utilization patterns consistent with those of previously published R. capsulatus genes. When various regions of the bchA locus and flanking sequences were subcloned into an expression vector and expressed in Escherichia coli, the three coding segments were all expressed as separate peptides. Finally, conservation of amino acid sequences between bchX and a subunit of the protochlorophyllide reductase (bchL, 34% identity) and the nitrogenase Fe protein (nifH, 30 to 37% identity) suggests structural and mechanistic commonalities among all three proteins.

Related Genes
MeSH Terms
Amino Acid Sequence Bacterial Proteins/chemistry,genetics Base Sequence Chromosome Mapping Genes, Bacterial Molecular Sequence Data Nitrogenase/genetics Open Reading Frames Oxidoreductases Protein Biosynthesis Rhodobacter capsulatus/enzymology,genetics
Chemicals
Bacterial Proteins bacteriochlorophyll A proteins, Bacteria Oxidoreductases Nitrogenase nitrogenase reductase
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Burke D H
Department of Chemistry, University of California, Berkeley.
Alberti M
Hearst J E
References (29)
29 references, click to expand
  1. Genetic-physical mapping of a photosynthetic gene cluster from R. capsulata.
    Cell. 1984 Jul;37(3):937-47 PMID: 6086150
  2. Alignment of genetic and restriction maps of the photosynthesis region of the Rhodopseudomonas capsulata chromosome by a conjugation-mediated marker rescue technique.
    J Bacteriol. 1983 May;154(2):580-90 PMID: 6302077
  3. Fe:S cluster ligands are the only cysteines required for nitrogenase Fe-protein activities.
    J Biol Chem. 1989 Jul 5;264(19):11270-4 PMID: 2500438
  4. Nucleotide sequence, organization, and nature of the protein products of the carotenoid biosynthesis gene cluster of Rhodobacter capsulatus.
    Mol Gen Genet. 1989 Apr;216(2-3):254-68 PMID: 2747617
  5. Genetic evidence for superoperonal organization of genes for photosynthetic pigments and pigment-binding proteins in Rhodobacter capsulatus.
    Mol Gen Genet. 1989 Jul;218(1):1-12 PMID: 2550757
  6. Improved predictions of secondary structures for RNA.
    Proc Natl Acad Sci U S A. 1989 Oct;86(20):7706-10 PMID: 2479010
  7. Promoter mapping and nucleotide sequence of the bchC bacteriochlorophyll biosynthesis gene from Rhodobacter capsulatus.
    Gene. 1989 Nov 30;83(2):251-61 PMID: 2555268
  8. Restoration of a translational stop-start overlap reinstates translational coupling in a mutant trpB'-trpA gene pair of the Escherichia coli tryptophan operon.
    Nucleic Acids Res. 1989 Nov 25;17(22):9333-40 PMID: 2685759
  9. Alternative mRNA structures of the cIII gene of bacteriophage lambda determine the rate of its translation initiation.
    J Mol Biol. 1989 Nov 20;210(2):265-80 PMID: 2532257
  10. Use of T7 RNA polymerase to direct expression of cloned genes.
    Methods Enzymol. 1990;185:60-89 PMID: 2199796
  11. Rhodobacter capsulatus genes involved in early steps of the bacteriochlorophyll biosynthetic pathway.
    J Bacteriol. 1990 Sep;172(9):5001-10 PMID: 2203738
  12. Improved sensitivity of biological sequence database searches.
    Comput Appl Biosci. 1990 Jul;6(3):237-45 PMID: 2207748
  13. Localized transposon Tn5 mutagenesis of the photosynthetic gene cluster of Rhodobacter sphaeroides.
    Mol Microbiol. 1990 Jun;4(6):977-89 PMID: 2170816
  14. Secondary structure of the ribosome binding site determines translational efficiency: a quantitative analysis.
    Proc Natl Acad Sci U S A. 1990 Oct;87(19):7668-72 PMID: 2217199
  15. Influence of mRNA determinants on translation initiation in Escherichia coli.
    J Mol Biol. 1991 Mar 5;218(1):83-97 PMID: 1705985
  16. Isolation and characterization of trans-acting mutations involved in oxygen regulation of puc operon transcription in Rhodobacter sphaeroides.
    J Bacteriol. 1992 Feb;174(4):1158-71 PMID: 1735710
  17. Organization of the genes coding for the reaction-centre L and M subunits and B870 antenna polypeptides alpha and beta from the aerobic photosynthetic bacterium Erythrobacter species OCH114.
    Mol Microbiol. 1991 Jun;5(6):1459-68 PMID: 1787796
  18. Crystallographic structure of the nitrogenase iron protein from Azotobacter vinelandii.
    Science. 1992 Sep 18;257(5077):1653-9 PMID: 1529353
  19. Light-independent chlorophyll biosynthesis: involvement of the chloroplast gene chlL (frxC).
    Plant Cell. 1992 Aug;4(8):929-40 PMID: 1392602
  20. Conservation of the photosynthesis gene cluster in Rhodospirillum centenum.
    Mol Microbiol. 1992 Sep;6(18):2683-91 PMID: 1447976
  21. bchFNBH bacteriochlorophyll synthesis genes of Rhodobacter capsulatus and identification of the third subunit of light-independent protochlorophyllide reductase in bacteria and plants.
    J Bacteriol. 1993 Apr;175(8):2414-22 PMID: 8385667
  22. Transcriptional regulation of several genes for bacteriochlorophyll biosynthesis in Rhodopseudomonas capsulata in response to oxygen.
    J Bacteriol. 1983 Nov;156(2):686-94 PMID: 6415036
  23. The biosynthesis of bacteriochlorophyll. The characterization of latter stage intermediates from mutants of Rhodopseudomonas spheroides.
    Biochemistry. 1969 Aug;8(8):3473-82 PMID: 4309211
  24. A possible alternate pathway of bacteriochlorophyll biosynthesis in a mutant of Rhodopseudomonas sphaeroides.
    Biochemistry. 1975 Jul 15;14(14):3132-7 PMID: 1080053
  25. Map of genes for carotenoid and bacteriochlorophyll biosynthesis in Rhodopseudomonas capsulata.
    J Bacteriol. 1976 May;126(2):619-29 PMID: 1262313
  26. DNA sequencing with chain-terminating inhibitors.
    Proc Natl Acad Sci U S A. 1977 Dec;74(12):5463-7 PMID: 271968
  27. Structure and function of nitrogenase.
    Annu Rev Biochem. 1979;48:387-418 PMID: 224803
  28. Mobilization of the genes for photosynthesis from Rhodopseudomonas capsulata by a promiscuous plasmid.
    J Bacteriol. 1981 Jun;146(3):1003-12 PMID: 6787008
  29. Primary structure of the L subunit of the reaction center from Rhodopseudomonas sphaeroides.
    Proc Natl Acad Sci U S A. 1984 Dec;81(23):7303-7 PMID: 6095283
Article Info
Journal
Journal of bacteriology
Abbr.
J Bacteriol
ISSN
0021-9193
Published
1993-04-00
Pages
2407-13
Language
English
Region
United States
NLM ID
2985120R
PMCID
PMC204530
Subset
IM
Grants
NIGMS NIH HHS · GM 30786 · United States
Databases
GENBANK
Z11165
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