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PMID: 839855 Published · ppublish English Journal Article Research Support, U.S. Gov't, Non-P.H.S. Research Support, U.S. Gov't, P.H.S.

Conformational analysis of the 20 naturally occurring amino acid residues using ECEPP.

Macromolecules ·Vol. 10 ·No. 1 ·1977-00-00 ·Pages 1-9

Zimmerman SS, Pottle MS, Némethy G, Scheraga HA

Abstract

Conformational energy calculations using ECEPP (Empirical Conformational Energy Program for Peptides) were carried out on the N-acetyl-N'-methylamides of the 20 naturally occurring amino acids. Minimum-energy conformations were located, and the relative conformational energy, librational entropy, and free energy each minimum were calculated. The effects of intrinsic torsional potentials, intramolecular hydrogen bonds, and librational entropy on relative conformational energies and locations of minima are discussed. The results are categorized most easily by use of a new conformational letter code that is introduced here.

MeSH Terms
Amino Acids Chemical Phenomena Chemistry Computers Mathematics Models, Structural Molecular Conformation Thermodynamics
Chemicals
Amino Acids
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Zimmerman S S
Pottle M S
Némethy G
Scheraga H A
Article Info
Journal
Macromolecules
Abbr.
Macromolecules
ISSN
0024-9297
Published
1977-00-00
Pages
1-9
Language
English
Region
United States
NLM ID
0365316
Subset
IM
Analysis Services
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