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PMID: 8388248 Published · ppublish English Journal Article

An HLA-DR typing protocol using group-specific PCR-amplification followed by restriction enzyme digests.

European journal of immunogenetics : official journal of the British Society for Histocompatibility and Immunogenetics ·Vol. 20 ·No. 2 ·1993-04-00 ·Pages 103-9

Westman P, Kuismin T, Partanen J, Koskimies S

Abstract

A simple PCR-based protocol for HLA-DR typing suitable for a routine practice is described. The method involves, first, a PCR amplification with seven different, group-specific (DR1, DR2, DR4, DR7, DR9, DR10, and DR3+5+6+8) primer-pairs, and second, typing of HLA-DR allele more exactly in DR1, DR2, DR4, and DR3+5+6+8 groups by digestion of PCR products with restriction enzymes distinguishing different HLA-DR types within each of the groups. Altogether 24 HLA-DR alleles, or any combination of these, can be typed. The whole procedure, starting from a blood sample, can be carried out during a single working-day. The method was tested by typing a set of homozygous cell lines, as well as a local panel previously typed by PCR/oligotyping. Also, 227 patients waiting for transplantation were typed to test the method in a routine setting. The results suggest that this kind of approach gives reliable HLA-DR types and works well in the routine use.

MeSH Terms
Alleles Base Sequence DNA/genetics DNA Restriction Enzymes Evaluation Studies as Topic Gene Amplification HLA-DR Antigens/classification,genetics Histocompatibility Testing/methods Humans Molecular Sequence Data Polymerase Chain Reaction
Chemicals
HLA-DR Antigens DNA DNA Restriction Enzymes
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Westman P
Finnish Red Cross Blood Transfusion Service, Helsinki.
Kuismin T
Partanen J
Koskimies S
Article Info
Journal
European journal of immunogenetics : official journal of the British Society for Histocompatibility and Immunogenetics
Abbr.
Eur J Immunogenet
ISSN
0960-7420
Published
1993-04-00
Pages
103-9
Language
English
Region
England
NLM ID
9106962
Subset
IM
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