Home LiteratureArticle Details
PMID: 8142900 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, P.H.S.

Solution structure of villin 14T, a domain conserved among actin-severing proteins.

Protein science : a publication of the Protein Society ·Vol. 3 ·No. 1 ·1994-01-00 ·Pages 70-81

Markus MA, Nakayama T, Matsudaira P, Wagner G

Abstract

The solution structure of the N-terminal domain of the actin-severing protein villin has been determined by multidimensional heteronuclear resonance spectroscopy. Villin is a member of a family of actin-severing proteins that regulate the organization of actin in the eukaryotic cytoskeleton. Members of this family are built from 3 or 6 homologous repeats of a structural domain of approximately 130 amino acids that is unrelated to any previously known structure. The N-terminal domain of villin (14T) contains a central beta-sheet with 4 antiparallel strands and a fifth parallel strand at one edge. This sheet is sandwiched between 2 helices on one side and a 2-stranded parallel beta-sheet with another helix on the other side. The strongly conserved sequence characteristic of the protein family corresponds to internal hydrophobic residues. Calcium titration experiments suggest that there are 2 binding sites for Ca2+, a stronger site near the N-terminal end of the longest helix, with a Kd of 1.8 +/- 0.4 mM, and a weaker site near the C-terminal end of the same helix, with a Kd of 11 +/- 2 mM. Mutational and biochemical studies of this domain in several members of the family suggest that the actin monomer binding site is near the parallel strand at the edge of the central beta-sheet.

MeSH Terms
Binding Sites Calcium/metabolism Calcium-Binding Proteins/chemistry,metabolism Carrier Proteins/chemistry,metabolism Computer Simulation Escherichia coli Magnetic Resonance Spectroscopy Microfilament Proteins/chemistry,metabolism Models, Molecular Molecular Structure Protein Structure, Secondary Recombinant Proteins Repetitive Sequences, Nucleic Acid Solutions
Chemicals
Calcium-Binding Proteins Carrier Proteins Microfilament Proteins Recombinant Proteins Solutions villin Calcium
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Markus M A
Committee on Higher Degrees in Biophysics, Harvard University, Cambridge, Massachusetts 02138.
Nakayama T
Matsudaira P
Wagner G
References (14)
14 references, click to expand
  1. The solution structure of eglin c based on measurements of many NOEs and coupling constants and its comparison with X-ray structures.
    Protein Sci. 1992 Jun;1(6):736-51 PMID: 1304915
  2. The anatomy and taxonomy of protein structure.
    Adv Protein Chem. 1981;34:167-339 PMID: 7020376
  3. Pieces in the actin-severing protein puzzle.
    Cell. 1988 Jul 15;54(2):139-40 PMID: 2839297
  4. Villin sequence and peptide map identify six homologous domains.
    Proc Natl Acad Sci U S A. 1988 Jul;85(14):4986-90 PMID: 2839826
  5. Functional comparison of villin and gelsolin. Effects of Ca2+, KCl, and polyphosphoinositides.
    J Biol Chem. 1988 Nov 15;263(32):16738-43 PMID: 2846546
  6. Nucleotide sequence of pig plasma gelsolin. Comparison of protein sequence with human gelsolin and other actin-severing proteins shows strong homologies and evidence for large internal repeats.
    J Mol Biol. 1988 Oct 20;203(4):1127-33 PMID: 2850369
  7. An efficient 3D NMR technique for correlating the proton and 15N backbone amide resonances with the alpha-carbon of the preceding residue in uniformly 15N/13C enriched proteins.
    J Biomol NMR. 1991 May;1(1):99-104 PMID: 1668719
  8. Stereospecific nuclear magnetic resonance assignments of the methyl groups of valine and leucine in the DNA-binding domain of the 434 repressor by biosynthetically directed fractional 13C labeling.
    Biochemistry. 1989 Sep 19;28(19):7510-6 PMID: 2692701
  9. Structural principles of actin-binding proteins.
    Curr Opin Cell Biol. 1989 Feb;1(1):15-22 PMID: 2698205
  10. Electrostatic contributions to the binding of Ca2+ in calbindin D9k.
    Biochemistry. 1991 Jan 8;30(1):154-62 PMID: 1988017
  11. Two of the three actin-binding domains of gelsolin bind to the same subdomain of actin. Implications of capping and severing mechanisms.
    FEBS Lett. 1991 Mar 11;280(1):70-4 PMID: 1849098
  12. Are the conserved sequences in segment 1 of gelsolin important for binding actin?
    J Cell Biol. 1992 Mar;116(5):1135-43 PMID: 1310993
  13. Support of 1H NMR assignments in proteins by biosynthetically directed fractional 13C-labeling.
    J Biomol NMR. 1992 Jul;2(4):323-34 PMID: 1324756
  14. Overcoming the overlap problem in the assignment of 1H NMR spectra of larger proteins by use of three-dimensional heteronuclear 1H-15N Hartmann-Hahn-multiple quantum coherence and nuclear Overhauser-multiple quantum coherence spectroscopy: application to interleukin 1 beta.
    Biochemistry. 1989 Jul 25;28(15):6150-6 PMID: 2675964
Article Info
Journal
Protein science : a publication of the Protein Society
Abbr.
Protein Sci
ISSN
0961-8368
Published
1994-01-00
Pages
70-81
Language
English
Region
United States
NLM ID
9211750
PMCID
PMC2142479
Subset
IM
Grants
NIDDK NIH HHS · DK35306 · United States
NIGMS NIH HHS · GM38608 · United States
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com