Home LiteratureArticle Details
PMID: 7809107 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Transcriptional induction of Ty recombination in yeast.

Nevo-Caspi Y, Kupiec M

Abstract

Families of repeated sequences are present in the genomes of all eukaryotes. Little is known about the mechanism(s) that prevents recombination between repeated sequences. In the yeast Saccharomyces cerevisiae, recombination between homologous sequences placed at nonhomologous locations in the genome (ectopic recombination) has been shown to occur at high frequencies for artificially created repeats, but at relatively low frequencies for a natural family of repeated sequences, the Ty family. We have previously shown that a high level of Ty cDNA in the cell causes an increase in the rate of nonreciprocal recombination (gene conversion) of a marked Ty element. In the present study, we show that it is also possible to elevate the rate of recombination of a marked Ty by increasing its transcription. This induction is different from, and acts synergistically to, the one seen upon increased levels of donor Ty cDNA. We show that the induction by transcription does not require the products of the RAD50, RAD51, and RAD57 genes. In contrast, cDNA-mediated recombination is dependent on the product of the RAD51 gene but not on products of the genes RAD50 or RAD57.

Related Genes
MeSH Terms
DNA Repair DNA, Fungal/genetics Gene Conversion Gene Expression Regulation, Fungal Recombination, Genetic Repetitive Sequences, Nucleic Acid Saccharomyces cerevisiae/genetics Transcription, Genetic
Chemicals
DNA, Fungal
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Nevo-Caspi Y
Department of Molecular Microbiology and Biotechnology, Tel Aviv University, Ramat Aviv, Israel.
Kupiec M
References (38)
38 references, click to expand
  1. Meiotic recombination between repeated transposable elements in Saccharomyces cerevisiae.
    Mol Cell Biol. 1988 Jul;8(7):2942-54 PMID: 2841590
  2. Construction of LYS2 cartridges for use in genetic manipulations of Saccharomyces cerevisiae.
    Gene. 1986;46(2-3):237-45 PMID: 3542721
  3. Yeast mer1 mutants display reduced levels of meiotic recombination.
    Genetics. 1989 Feb;121(2):237-47 PMID: 2659434
  4. A chromosome containing HOT1 preferentially receives information during mitotic interchromosomal gene conversion.
    Genetics. 1990 Mar;124(3):561-72 PMID: 2179054
  5. The RAD50 gene, a member of the double strand break repair epistasis group, is not required for spontaneous mitotic recombination in yeast.
    Curr Genet. 1990 Aug;18(2):111-6 PMID: 2225142
  6. The strong ADH1 promoter stimulates mitotic and meiotic recombination at the ADE6 gene of Schizosaccharomyces pombe.
    Mol Cell Biol. 1991 Jan;11(1):289-98 PMID: 1986226
  7. Allelic and ectopic interactions in recombination-defective yeast strains.
    Genetics. 1991 Jan;127(1):53-60 PMID: 2016046
  8. Nucleotide sequence of the RAD57 gene of Saccharomyces cerevisiae.
    Gene. 1991 Aug 30;105(1):139-40 PMID: 1937004
  9. DNA-binding protein RAP1 stimulates meiotic recombination at the HIS4 locus in yeast.
    Proc Natl Acad Sci U S A. 1991 Nov 1;88(21):9755-9 PMID: 1946399
  10. Involvement of cDNA in homologous recombination between Ty elements in Saccharomyces cerevisiae.
    Mol Cell Biol. 1992 Apr;12(4):1613-20 PMID: 1372387
  11. Rad51 protein involved in repair and recombination in S. cerevisiae is a RecA-like protein.
    Cell. 1992 May 1;69(3):457-70 PMID: 1581961
  12. Posttranslational control of Ty1 retrotransposition occurs at the level of protein processing.
    Mol Cell Biol. 1992 Jun;12(6):2813-25 PMID: 1317008
  13. Semidominant suppressors of Srs2 helicase mutations of Saccharomyces cerevisiae map in the RAD51 gene, whose sequence predicts a protein with similarities to procaryotic RecA proteins.
    Mol Cell Biol. 1992 Jul;12(7):3224-34 PMID: 1620127
  14. Nucleotide sequence and transcriptional regulation of the yeast recombinational repair gene RAD51.
    Mol Cell Biol. 1992 Jul;12(7):3235-46 PMID: 1620128
  15. Ectopic recombination between Ty elements in Saccharomyces cerevisiae is not induced by DNA damage.
    Mol Cell Biol. 1992 Oct;12(10):4441-8 PMID: 1328855
  16. Strand-selective repair of DNA damage in the yeast GAL7 gene requires RNA polymerase II.
    J Biol Chem. 1992 Nov 15;267(32):23175-82 PMID: 1429664
  17. Preferential repair of cyclobutane pyrimidine dimers in the transcribed strand of a gene in yeast chromosomes and plasmids is dependent on transcription.
    Proc Natl Acad Sci U S A. 1992 Nov 15;89(22):10696-700 PMID: 1438266
  18. Transcription enhances intrachromosomal homologous recombination in mammalian cells.
    Mol Cell Biol. 1992 Dec;12(12):5311-8 PMID: 1333040
  19. Molecular mechanism of transcription-repair coupling.
    Science. 1993 Apr 2;260(5104):53-8 PMID: 8465200
  20. DNA repair helicase: a component of BTF2 (TFIIH) basic transcription factor.
    Science. 1993 Apr 2;260(5104):58-63 PMID: 8465201
  21. The immunoglobulin mu enhancer core establishes local factor access in nuclear chromatin independent of transcriptional stimulation.
    Genes Dev. 1993 Oct;7(10):2016-32 PMID: 8406005
  22. A V(D)J recombinase-inducible B-cell line: role of transcriptional enhancer elements in directing V(D)J recombination.
    Mol Cell Biol. 1993 Oct;13(10):6223-30 PMID: 8413222
  23. Transcription-coupled DNA repair.
    Science. 1993 Oct 15;262(5132):439-40 PMID: 8211165
  24. Promoter, enhancer and silencer elements regulate rearrangement of an immunoglobulin transgene.
    EMBO J. 1993 Dec;12(12):4615-23 PMID: 8223471
  25. The Saccharomyces cerevisiae DNA repair gene RAD25 is required for transcription by RNA polymerase II.
    Genes Dev. 1993 Nov;7(11):2161-71 PMID: 7693549
  26. Yeast origin recognition complex is involved in DNA replication and transcriptional silencing.
    Nature. 1993 Nov 4;366(6450):87-9 PMID: 8232543
  27. Origin recognition complex (ORC) in transcriptional silencing and DNA replication in S. cerevisiae.
    Science. 1993 Dec 17;262(5141):1838-44 PMID: 8266071
  28. Yeast origin recognition complex functions in transcription silencing and DNA replication.
    Science. 1993 Dec 17;262(5141):1844-9 PMID: 8266072
  29. Dual roles of a multiprotein complex from S. cerevisiae in transcription and DNA repair.
    Cell. 1993 Dec 31;75(7):1379-87 PMID: 8269516
  30. Unrepaired heteroduplex DNA in Saccharomyces cerevisiae is decreased in RAD1 RAD52-independent recombination.
    Genetics. 1994 Jun;137(2):393-405 PMID: 8070653
  31. Genetic control of diploid recovery after gamma-irradiation in the yeast Saccharomyces cerevisiae.
    Mutat Res. 1980 Dec;73(2):251-65 PMID: 7007877
  32. One-step gene disruption in yeast.
    Methods Enzymol. 1983;101:202-11 PMID: 6310324
  33. Model for homologous recombination during transfer of DNA into mouse L cells: role for DNA ends in the recombination process.
    Mol Cell Biol. 1984 Jun;4(6):1020-34 PMID: 6330525
  34. DNA repair in an active gene: removal of pyrimidine dimers from the DHFR gene of CHO cells is much more efficient than in the genome overall.
    Cell. 1985 Feb;40(2):359-69 PMID: 3838150
  35. A positive selection for mutants lacking orotidine-5'-phosphate decarboxylase activity in yeast: 5-fluoro-orotic acid resistance.
    Mol Gen Genet. 1984;197(2):345-6 PMID: 6394957
  36. Ty elements transpose through an RNA intermediate.
    Cell. 1985 Mar;40(3):491-500 PMID: 2982495
  37. Recombination between immunoglobulin variable region gene segments is enhanced by transcription.
    Nature. 1986 Dec 11-17;324(6097):585-9 PMID: 3491327
  38. Elevated recombination rates in transcriptionally active DNA.
    Cell. 1989 Feb 24;56(4):619-30 PMID: 2645056
Article Info
Journal
Proceedings of the National Academy of Sciences of the United States of America
Abbr.
Proc Natl Acad Sci U S A
ISSN
0027-8424
Published
1994-12-20
Pages
12711-5
Language
English
Region
United States
NLM ID
7505876
PMCID
PMC45509
Subset
IM
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com