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PMID: 7739544 Published · ppublish English Journal Article Research Support, U.S. Gov't, P.H.S.

The GCR1 requirement for yeast glycolytic gene expression is suppressed by dominant mutations in the SGC1 gene, which encodes a novel basic-helix-loop-helix protein.

Molecular and cellular biology ·Vol. 15 ·No. 5 ·1995-05-00 ·Pages 2646-53

Nishi K, Park CS, Pepper AE, Eichinger G, Innis MA, Holland MJ

Abstract

The GCR1 gene product is required for maximal transcription of yeast glycolytic genes and for growth of yeast strains in media containing glucose as a carbon source. Dominant mutations in two genes, SGC1 and SGC2, as well as recessive mutations in the SGC5 gene were identified as suppressors of the growth and transcriptional defects caused by a gcr1 null mutation. The wild-type and mutant alleles of SGC1 were cloned and sequenced. The predicted amino acid sequence of the SGC1 gene product includes a region with substantial similarity to the basic-helix-loop-helix domain of the Myc family of DNA-binding proteins. The SGC1-1 dominant mutant allele contained a substitution of glutamine for a highly conserved glutamic acid residue within the putative basic DNA binding domain. A second dominant mutant, SGC1-2, contained a valine-for-isoleucine substitution within the putative loop region. The SGC1-1 dominant mutant suppressed the GCR1 requirement for enolase, glyceraldehyde-3-phosphate dehydrogenase, phosphoglycerate kinase, phosphoglycerate mutase, and pyruvate kinase gene expression. Expression of the yeast enolase genes was reduced three- to fivefold in strains carrying an sgc1 null mutation, demonstrating that SGC1 is required for maximal enolase gene expression. Expression of the enolase genes in strains carrying gcr1 and sgc1 double null mutations was substantially less than observed for strains carrying either null mutation alone, suggesting that GCR1 and SGC1 function on parallel pathways to activate yeast glycolytic gene expression.

MeSH Terms
Alleles Amino Acid Sequence Base Sequence DNA, Fungal/genetics DNA-Binding Proteins/genetics,metabolism Fungal Proteins/genetics,metabolism Gene Expression Regulation, Fungal Genes, Dominant Genes, Fungal Glycolysis/genetics Helix-Loop-Helix Motifs/genetics Molecular Sequence Data Mutation Restriction Mapping Saccharomyces cerevisiae/genetics,metabolism Saccharomyces cerevisiae Proteins Sequence Homology, Amino Acid Suppression, Genetic Trans-Activators Transcription Factors/genetics
Chemicals
DNA, Fungal DNA-Binding Proteins Fungal Proteins GCR1 protein, S cerevisiae Saccharomyces cerevisiae Proteins TYE7 protein, S cerevisiae Trans-Activators Transcription Factors
Authors & Affiliations
6 authors, click to expand affiliations / ORCID
Nishi K
Department of Biological Chemistry, School of Medicine, University of California, Davis 95616-8635, USA.
Park C S
Pepper A E
Eichinger G
Innis M A
Holland M J
References (36)
36 references, click to expand
  1. Characterization of the DNA-binding activity of GCR1: in vivo evidence for two GCR1-binding sites in the upstream activating sequence of TPI of Saccharomyces cerevisiae.
    Mol Cell Biol. 1992 Jun;12(6):2690-700 PMID: 1588965
  2. Yeast centromere binding protein CBF1, of the helix-loop-helix protein family, is required for chromosome stability and methionine prototrophy.
    Cell. 1990 May 4;61(3):437-46 PMID: 2185892
  3. Role of GCR2 in transcriptional activation of yeast glycolytic genes.
    Mol Cell Biol. 1992 Sep;12(9):3834-42 PMID: 1508187
  4. Single amino acid substitutions alter helix-loop-helix protein specificity for bases flanking the core CANNTG motif.
    EMBO J. 1992 Nov;11(11):4103-9 PMID: 1327757
  5. Concerted action of the transcriptional activators REB1, RAP1, and GCR1 in the high-level expression of the glycolytic gene TPI.
    Mol Cell Biol. 1993 Jan;13(1):543-50 PMID: 8417350
  6. A complex regulatory element from the yeast gene ENO2 modulates GCR1-dependent transcriptional activation.
    Mol Cell Biol. 1993 Apr;13(4):2623-33 PMID: 8455635
  7. Transcriptional control of yeast phosphoglycerate mutase-encoding gene.
    Gene. 1993 Mar 30;125(2):125-33 PMID: 8462867
  8. Recognition by Max of its cognate DNA through a dimeric b/HLH/Z domain.
    Nature. 1993 May 6;363(6424):38-45 PMID: 8479534
  9. The upstream repression sequence from the yeast enolase gene ENO1 is a complex regulatory element that binds multiple trans-acting factors including REB1.
    J Biol Chem. 1994 Apr 1;269(13):9790-7 PMID: 8144571
  10. The primary structure of a glyceraldehyde-3-phosphate dehydrogenase gene from Saccharomyces cerevisiae.
    J Biol Chem. 1979 Oct 10;254(19):9839-45 PMID: 385592
  11. Molecular cloning of the actin gene from yeast Saccharomyces cerevisiae.
    Nucleic Acids Res. 1980 Mar 11;8(5):1043-59 PMID: 7003553
  12. The gcr (glycolysis regulation) mutation of Saccharomyces cerevisiae.
    J Biol Chem. 1981 Dec 25;256(24):13074-8 PMID: 7031056
  13. Transformation of intact yeast cells treated with alkali cations.
    J Bacteriol. 1983 Jan;153(1):163-8 PMID: 6336730
  14. The isolation, characterization, and sequence of the pyruvate kinase gene of Saccharomyces cerevisiae.
    J Biol Chem. 1983 Feb 25;258(4):2193-201 PMID: 6185493
  15. Nucleotide sequence of the triose phosphate isomerase gene of Saccharomyces cerevisiae.
    J Mol Appl Genet. 1982;1(5):419-34 PMID: 6759603
  16. The primary structure of the Saccharomyces cerevisiae gene for 3-phosphoglycerate kinase.
    Nucleic Acids Res. 1982 Dec 11;10(23):7791-808 PMID: 6296791
  17. Homologous nucleotide sequences at the 5' termini of messenger RNAs synthesized from the yeast enolase and glyceraldehyde-3-phosphate dehydrogenase gene families. The primary structure of a third yeast glyceraldehyde-3-phosphate dehydrogenase gene.
    J Biol Chem. 1983 Apr 25;258(8):5291-9 PMID: 6833300
  18. Beta-galactosidase gene fusions for analyzing gene expression in escherichia coli and yeast.
    Methods Enzymol. 1983;100:293-308 PMID: 6312261
  19. Differential expression of the three yeast glyceraldehyde-3-phosphate dehydrogenase genes.
    J Biol Chem. 1985 Dec 5;260(28):15019-27 PMID: 3905788
  20. Regulation of the yeast HO gene.
    Cold Spring Harb Symp Quant Biol. 1985;50:643-50 PMID: 3938367
  21. Identification of a regulatory region that mediates glucose-dependent induction of the Saccharomyces cerevisiae enolase gene ENO2.
    Mol Cell Biol. 1986 Jul;6(7):2287-97 PMID: 3537717
  22. Glycolytic gene expression in Saccharomyces cerevisiae: nucleotide sequence of GCR1, null mutants, and evidence for expression.
    Mol Cell Biol. 1986 Nov;6(11):3774-84 PMID: 3025612
  23. The GCR1 gene encodes a positive transcriptional regulator of the enolase and glyceraldehyde-3-phosphate dehydrogenase gene families in Saccharomyces cerevisiae.
    Mol Cell Biol. 1987 Feb;7(2):813-20 PMID: 3547083
  24. Transcriptional regulation of an hsp70 heat shock gene in the yeast Saccharomyces cerevisiae.
    Mol Cell Biol. 1987 May;7(5):1906-16 PMID: 3037338
  25. Transcription of the constitutively expressed yeast enolase gene ENO1 is mediated by positive and negative cis-acting regulatory sequences.
    Mol Cell Biol. 1987 Aug;7(8):2753-61 PMID: 3313003
  26. Mutations that disrupt DNA binding and dimer formation in the E47 helix-loop-helix protein map to distinct domains.
    Proc Natl Acad Sci U S A. 1990 Jun;87(12):4722-6 PMID: 2112746
  27. Multiple factors bind the upstream activation sites of the yeast enolase genes ENO1 and ENO2: ABFI protein, like repressor activator protein RAP1, binds cis-acting sequences which modulate repression or activation of transcription.
    Mol Cell Biol. 1990 Sep;10(9):4872-85 PMID: 2201905
  28. ARS binding factor 1 binds adjacent to RAP1 at the UASs of the yeast glycolytic genes PGK and PYK1.
    Nucleic Acids Res. 1990 Sep 25;18(18):5393-9 PMID: 2120676
  29. The yeast regulatory gene PHO4 encodes a helix-loop-helix motif.
    Yeast. 1990 Sep-Oct;6(5):451-4 PMID: 2220078
  30. gcr2, a new mutation affecting glycolytic gene expression in Saccharomyces cerevisiae.
    Mol Cell Biol. 1990 Dec;10(12):6389-96 PMID: 2247062
  31. GCR1 of Saccharomyces cerevisiae encodes a DNA binding protein whose binding is abolished by mutations in the CTTCC sequence motif.
    Proc Natl Acad Sci U S A. 1991 Nov 1;88(21):9443-7 PMID: 1946357
  32. A multi-component upstream activation sequence of the Saccharomyces cerevisiae glyceraldehyde-3-phosphate dehydrogenase gene promoter.
    Mol Gen Genet. 1991 Dec;231(1):22-32 PMID: 1753943
  33. Role of neighbouring bases and assessment of strand specificity in ethylmethanesulphonate and N-methyl-N'-nitro-N-nitrosoguanidine mutagenesis in the SUP4-o gene of Saccharomyces cerevisiae.
    J Mol Biol. 1988 Dec 5;204(3):561-8 PMID: 3066906
  34. Connections between transcriptional activators, silencers, and telomeres as revealed by functional analysis of a yeast DNA-binding protein.
    Mol Cell Biol. 1988 Dec;8(12):5086-99 PMID: 3072472
  35. Function of the PHO regulatory genes for repressible acid phosphatase synthesis in Saccharomyces cerevisiae.
    Mol Gen Genet. 1989 May;217(1):40-6 PMID: 2671650
  36. The INO2 gene of Saccharomyces cerevisiae encodes a helix-loop-helix protein that is required for activation of phospholipid synthesis.
    Nucleic Acids Res. 1992 Jun 25;20(12):3253 PMID: 1620625
Article Info
Journal
Molecular and cellular biology
Abbr.
Mol Cell Biol
ISSN
0270-7306
Published
1995-05-00
Pages
2646-53
Language
English
Region
United States
NLM ID
8109087
PMCID
PMC230494
Subset
IM
Grants
NIGMS NIH HHS · GM30307 · United States
Databases
GENBANK
L38594
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