Home LiteratureArticle Details
PMID: 7592347 Published · ppublish English Journal Article Research Support, U.S. Gov't, Non-P.H.S. Research Support, U.S. Gov't, P.H.S.

Characterization of Mu prophage lacking the central strong gyrase binding site: localization of the block in replication.

Journal of bacteriology ·Vol. 177 ·No. 20 ·1995-10-00 ·Pages 5937-42

Pato ML, Karlok M, Wall C, Higgins NP

Abstract

Bacteriophage Mu contains an unusually strong DNA gyrase binding site (SGS), located near the center of its genome, that is required for efficient Mu DNA replication (M. L. Pato, Proc. Natl. Acad. Sci. USA 91:7056-7060, 1994; M. L. Pato, M. M. Howe, and N. P. Higgins, Proc. Natl. Acad. Sci. USA 87:8716-8720, 1990). Replication of wild-type Mu initiates about 10 min after induction of a lysogen, while replication in the absence of the SGS is delayed about an hour. To determine which step in the replication pathway is blocked in the absence of the SGS, we inactivated the SGS by deletion and by insertion and studied the effects of these alterations on various stages of Mu DNA replication. Following induction in the absence of a functional SGS, early transcription and synthesis of the Mu-encoded replication proteins occurred normally. However, neither strand transfer nor cleavage at the Mu genome termini could be detected 40 min after induction. The data are most consistent with a requirement for the SGS in the efficient synapsis of the Mu prophage termini to form a separate chromosomal domain.

MeSH Terms
Bacteriophage mu/enzymology,genetics,growth & development,metabolism Base Sequence Binding Sites/genetics Consensus Sequence DNA Topoisomerases, Type II/metabolism Lysogeny Molecular Sequence Data Mutagenesis Protein Binding Protein Biosynthesis Proviruses/enzymology,genetics,growth & development,metabolism Recombination, Genetic Sequence Deletion Transcription, Genetic Virus Replication
Chemicals
DNA Topoisomerases, Type II
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Pato M L
Department of Microbiology, University of Colorado Health Sciences Center, Denver 80262, USA.
Karlok M
Wall C
Higgins N P
References (32)
32 references, click to expand
  1. Transposition of Mu DNA: joining of Mu to target DNA can be uncoupled from cleavage at the ends of Mu.
    Cell. 1987 Nov 6;51(3):493-501 PMID: 2822259
  2. Transpososomes: stable protein-DNA complexes involved in the in vitro transposition of bacteriophage Mu DNA.
    Cell. 1987 Apr 24;49(2):253-62 PMID: 3032448
  3. The partition locus of plasmid pSC101 is a specific binding site for DNA gyrase.
    EMBO J. 1988 Jun;7(6):1889-95 PMID: 2844527
  4. DNA gyrase binds to the family of prokaryotic repetitive extragenic palindromic sequences.
    Proc Natl Acad Sci U S A. 1988 Dec;85(23):8850-4 PMID: 2848243
  5. Interaction of distinct domains in Mu transposase with Mu DNA ends and an internal transpositional enhancer.
    Nature. 1989 Apr 20;338(6217):656-8 PMID: 2539564
  6. Efficient Mu transposition requires interaction of transposase with a DNA sequence at the Mu operator: implications for regulation.
    Cell. 1989 Jul 28;58(2):399-408 PMID: 2546681
  7. Action at a distance in Mu DNA transposition: an enhancer-like element is the site of action of supercoiling relief activity by integration host factor (IHF).
    EMBO J. 1989 Nov;8(11):3483-9 PMID: 2555166
  8. A DNA gyrase-binding site at the center of the bacteriophage Mu genome is required for efficient replicative transposition.
    Proc Natl Acad Sci U S A. 1990 Nov;87(22):8716-20 PMID: 2174162
  9. Transcription regulates oxolinic acid-induced DNA gyrase cleavage at specific sites on the E. coli chromosome.
    Nucleic Acids Res. 1990 Dec 25;18(24):7389-96 PMID: 2175434
  10. DNA-protein complexes during attachment-site synapsis in Mu DNA transposition.
    EMBO J. 1991 Jun;10(6):1585-91 PMID: 1851088
  11. Physical mapping of virulence-associated genes in Pseudomonas aeruginosa by transverse alternating-field electrophoresis.
    Infect Immun. 1991 Oct;59(10):3596-603 PMID: 1910008
  12. Structural aspects of a higher order nucleoprotein complex: induction of an altered DNA structure at the Mu-host junction of the Mu type 1 transpososome.
    EMBO J. 1991 Oct;10(10):3051-9 PMID: 1655409
  13. Control of bacterial DNA supercoiling.
    Mol Microbiol. 1992 Feb;6(4):425-33 PMID: 1313943
  14. Assembly of the active form of the transposase-Mu DNA complex: a critical control point in Mu transposition.
    Cell. 1992 Jul 24;70(2):303-11 PMID: 1322248
  15. Transpositional recombination: mechanistic insights from studies of mu and other elements.
    Annu Rev Biochem. 1992;61:1011-51 PMID: 1323232
  16. Crucial role for DNA supercoiling in Mu transposition: a kinetic study.
    Proc Natl Acad Sci U S A. 1994 Jan 18;91(2):699-703 PMID: 8290584
  17. Participation of the bacteriophage Mu A protein and host factors in the initiation of Mu DNA synthesis in vitro.
    J Biol Chem. 1994 Jun 10;269(23):16469-77 PMID: 8206956
  18. A new component of bacteriophage Mu replicative transposition machinery: the Escherichia coli ClpX protein.
    Mol Microbiol. 1994 Mar;11(6):1109-16 PMID: 8022280
  19. Central location of the Mu strong gyrase binding site is obligatory for optimal rates of replicative transposition.
    Proc Natl Acad Sci U S A. 1994 Jul 19;91(15):7056-60 PMID: 8041745
  20. Electron microscopic evidence for linear insertion of bacteriophage MU-1 in lysogenic bacteria.
    J Virol. 1971 Oct;8(4):551-63 PMID: 4943078
  21. On the structure of the folded chromosome of Escherichia coli.
    J Mol Biol. 1972 Nov 14;71(2):127-47 PMID: 4564477
  22. On the control of transcription of bacteriophage Mu.
    Mol Gen Genet. 1974;131(2):85-96 PMID: 4420740
  23. Electron microscopy of membrane-associated folded chromosomes of Escherichia coli.
    Chromosoma. 1976 Mar 31;55(1):13-25 PMID: 767075
  24. State of prophage Mu DNA upon induction.
    Proc Natl Acad Sci U S A. 1977 Aug;74(8):3143-7 PMID: 333430
  25. DNA gyrase on the bacterial chromosome: DNA cleavage induced by oxolinic acid.
    J Mol Biol. 1979 Jun 25;131(2):287-302 PMID: 226717
  26. Replication of mini-Mu prophage DNA.
    Virology. 1981 Aug;113(1):379-87 PMID: 6455843
  27. Isolation and mapping of Mu nu mutants which grow in him mutants of E. coli.
    Virology. 1982 Jul 15;120(1):269-72 PMID: 6213091
  28. Multiple factors and processes involved in host cell killing by bacteriophage Mu: characterization and mapping.
    Virology. 1984 Jul 15;136(1):168-85 PMID: 6234699
  29. Site-specific recognition of the bacteriophage Mu ends by the Mu A protein.
    Cell. 1984 Dec;39(2 Pt 1):387-94 PMID: 6094016
  30. Sites of reaction of Escherichia coli DNA gyrase on pBR322 in vivo as revealed by oxolinic acid-induced plasmid linearization.
    J Mol Biol. 1985 Jan 5;181(1):63-74 PMID: 2984430
  31. Mutants of Escherichia coli defective for replicative transposition of bacteriophage Mu.
    J Bacteriol. 1986 Sep;167(3):905-19 PMID: 3017919
  32. Involvement of heat shock proteins in bacteriophage Mu development.
    J Bacteriol. 1987 Dec;169(12):5504-9 PMID: 2960662
Article Info
Journal
Journal of bacteriology
Abbr.
J Bacteriol
ISSN
0021-9193
Published
1995-10-00
Pages
5937-42
Language
English
Region
United States
NLM ID
2985120R
PMCID
PMC177422
Subset
IM
Grants
NIGMS NIH HHS · GM33143 · United States
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com