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PMID: 7003549 Published · ppublish English Comparative Study Journal Article Research Support, Non-U.S. Gov't

More ribosomal spacer sequences from Xenopus laevis.

Nucleic acids research ·Vol. 8 ·No. 3 ·1980-02-11 ·Pages 467-85

Moss T, Boseley PG, Birnstiel ML

Abstract

The base sequence analysis of a Xenopus laevis ribosomal DNA repeat (7) has been extended to cover almost the entire non-transcribed and external transcribed spacer. A compilation of these sequences is presented. All the repetitive and non-repetitive sequence elements of the spacer are identified and their evolution discussed. Comparison of the X.laevis and S.cerevisiae (25,26) ribosomal DNAs shows about 80% sequence conservation in the 18S gene but no sequence conservation, from the available data, in the external transcribed spacer. The sequence coding for the 3' terminus of the X.laevis 40S ribosomal precursor RNA is presented and its structural features analyzed.

MeSH Terms
Animals Base Sequence DNA/genetics Deoxyadenine Nucleotides/analysis Poly A/analysis Ribosomes/analysis Saccharomyces cerevisiae/genetics Xenopus laevis/genetics
Chemicals
Deoxyadenine Nucleotides Poly A poly(dA) DNA
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Moss T
Boseley P G
Birnstiel M L
References (30)
30 references, click to expand
  1. [Duplications of subunits of chromosome DNA during the evolution of Chironomus thummi].
    Chromosoma. 1965;17(2):139-80 PMID: 5894342
  2. An exonuclease induced by bacteriophage lambda. I. Preparation of the crystalline enzyme.
    J Biol Chem. 1967 Feb 25;242(4):672-8 PMID: 6017736
  3. Evolution of the transcription unit of ribosomal RNA.
    Proc Natl Acad Sci U S A. 1970 Mar;65(3):609-16 PMID: 5267142
  4. Transmission of sex cells of one species through the body of a second species in the genus Xenopus. II. Interspecific matings.
    Dev Biol. 1972 Mar;27(3):385-94 PMID: 5019136
  5. Enzymatic end-to end joining of DNA molecules.
    J Mol Biol. 1973 Aug 15;78(3):453-71 PMID: 4754844
  6. Improved estimation of secondary structure in ribonucleic acids.
    Nat New Biol. 1973 Nov 14;246(150):40-1 PMID: 4519026
  7. Preferential transcription of Xenopus laevis ribosomal RNA in interspecies hybrids between Xenopus laevis and Xenopus mulleri.
    J Mol Biol. 1973 Oct 25;80(2):217-28 PMID: 4763983
  8. Secondary structure maps of ribosomal RNA and DNA. I. Processing of Xenopus laevis ribosomal RNA and structure of single-stranded ribosomal DNA.
    J Mol Biol. 1974 Oct 25;89(2):379-95 PMID: 4444053
  9. Secondary structure maps of ribosomal RNA. II. Processing of mouse L-cell ribosomal RNA and variations in the processing pathway.
    J Mol Biol. 1974 Oct 25;89(2):397-407 PMID: 4475117
  10. Phosphorylation of double-stranded DNAs by T4 polynucleotide kinase.
    Biochemistry. 1976 May 4;15(9):1858-65 PMID: 178357
  11. Specificity of oligo (dT)-cellulose chromatography in the isolation of polyadenylated RNA.
    Anal Biochem. 1976 May 7;72:413-27 PMID: 782287
  12. Differences and similarities in chromatin structure of Neurospora crassa and higher eucaryotes.
    Cell. 1976 Jul;8(3):349-55 PMID: 133762
  13. A reinvestigation of 5' leads to 3' polarity in 40S ribosomal RNA precursor of Xenopus laevis.
    Cell. 1976 Jul;8(3):443-8 PMID: 954098
  14. Simple agar--urea-gel electrophoretic fractionation of high molecular weight ribonucleic acids.
    Anal Biochem. 1976 Nov;76(l):250-8 PMID: 793442
  15. A new method for sequencing DNA.
    Proc Natl Acad Sci U S A. 1977 Feb;74(2):560-4 PMID: 265521
  16. Promotor region for yeast 5S ribosomal RNA.
    Nature. 1977 Jun 16;267(5612):643-5 PMID: 327336
  17. Restriction analysis of the nontranscribed spacers of Xenopus laevis ribosomal DNA.
    Cell. 1977 Jul;11(3):599-607 PMID: 560255
  18. Ribosomal RNA genes of Saccharomyces cerevisiae. II. Physical map and nucleotide sequence of the 5 S ribosomal RNA gene and adjacent intergenic regions.
    J Biol Chem. 1977 Nov 25;252(22):8126-35 PMID: 334775
  19. Electron microscopic analysis of chromatin replication in the cellular blastoderm Drosophila melanogaster embryo.
    Cell. 1977 Nov;12(3):795-804 PMID: 411576
  20. Control of transcription termination.
    Annu Rev Biochem. 1978;47:967-96 PMID: 354508
  21. Electron microscopic analysis of chromosome metabolism in the Drosophila melanogaster embryo.
    Cold Spring Harb Symp Quant Biol. 1978;42 Pt 2:741-54 PMID: 98268
  22. Sequence organization of a cloned tDNA met fragment from Xenopus laevis.
    Cell. 1978 Jul;14(3):713-24 PMID: 688390
  23. Sequence organization of the spacer DNA in a ribosomal gene unit of Xenopus laevis.
    Cell. 1979 May;17(1):19-31 PMID: 455459
  24. DNA sequences of promoter regions for rRNA operons rrnE and rrnA in E. coli.
    Cell. 1979 May;17(1):201-9 PMID: 378405
  25. Identification of initiation sites for the in vitro transcription of rRNA operons rrnE and rrnA in E. coli.
    Cell. 1979 May;17(1):211-24 PMID: 378406
  26. Tandem promoters direct E. coli ribosomal RNA synthesis.
    Cell. 1979 May;17(1):225-34 PMID: 110460
  27. Polyamine-mediated phosphorylation of a nucleolar protein from Physarum polycephalum that stimulates rRNA synthesis.
    Proc Natl Acad Sci U S A. 1979 Jun;76(6):2541-5 PMID: 288043
  28. The putative promoter of a Xenopus laevis ribosomal gene is reduplicated.
    Nucleic Acids Res. 1979 Aug 24;6(12):3733-43 PMID: 493120
  29. A regulatory sequence near the 3' end of sea urchin histone genes.
    Nucleic Acids Res. 1979 Jul 11;6(9):2997-3008 PMID: 493132
  30. The nucleotide sequence of the initiation and termination sites for ribosomal RNA transcription in X. laevis.
    Cell. 1979 Oct;18(2):485-99 PMID: 498280
Article Info
Journal
Nucleic acids research
Abbr.
Nucleic Acids Res
ISSN
0305-1048
Published
1980-02-11
Pages
467-85
Language
English
Region
England
NLM ID
0411011
PMCID
PMC327284
Subset
IM
Databases
GENBANK
J01004, J01005, J01006, J01007
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