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PMID: 6774336 Published · ppublish English Comparative Study Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, Non-P.H.S. Research Support, U.S. Gov't, P.H.S.

Two control regions for eukaryotic tRNA gene transcription.

DeFranco D, Schmidt O, Söll D

Abstract

Two Drosophila tRNALys genes with identical coding sequences were shown to transcribe with very different efficiences in nuclear extracts from Xenopus oocytes. The use of recombinant plasmids in which the 5'-flanking sequences of these genes were either "switched" or replaced by defined pBR322 sequences revealed two control regions for tRNA gene transcription. An internal control region comprising the mature tRNA coding sequence (and possibly its 3'-flanking sequences) is sufficient for transcription initiation, and an external control region comprising the 5'-flanking sequences represses this transcription. All transcripts have short leader sequences. Altered precursor tRNAs transcribed from truncated tRNALys genes (missing a single base pair in the acceptor stem) are not processed well in vitro.

MeSH Terms
Animals Base Sequence Cloning, Molecular DNA, Recombinant/metabolism Drosophila melanogaster/genetics Electrophoresis, Polyacrylamide Gel Escherichia coli/genetics Female Gene Expression Regulation Models, Genetic Oocytes/metabolism Plasmids RNA, Transfer/genetics Templates, Genetic Transcription, Genetic Xenopus/cytology
Chemicals
DNA, Recombinant RNA, Transfer
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
DeFranco D
Schmidt O
Söll D
References (24)
24 references, click to expand
  1. The nucleotide sequence of a cloned Drosophila arginine tRNA gene and its in vitro transcription in Xenopus germinal vesicle extracts.
    J Biol Chem. 1979 Oct 25;254(20):10290-4 PMID: 114522
  2. Isolation of yeast tRNALeu genes. DNA sequence of a cloned tRNALeu3 gene.
    J Biol Chem. 1979 Dec 25;254(24):12306-9 PMID: 387786
  3. Transcription initiation of Xenopus 5S ribosomal RNA genes in vitro.
    Nucleic Acids Res. 1979 Oct 25;7(4):947-58 PMID: 503853
  4. Transcription of a cloned Bombyx mori tRNA2Ala gene: nucleotide sequence of the tRNA precursor and its processing in vitro.
    Cell. 1979 Nov;18(3):817-28 PMID: 260697
  5. The primary transcription product of a silkworm alanine tRNA gene: identification of in vitro sites of initiation, termination and processing.
    Cell. 1979 Dec;18(4):1217-29 PMID: 519766
  6. A control region in the center of the 5S RNA gene directs specific initiation of transcription: I. The 5' border of the region.
    Cell. 1980 Jan;19(1):13-25 PMID: 7357599
  7. A control region in the center of the 5S RNA gene directs specific initiation of transcription: II. The 3' border of the region.
    Cell. 1980 Jan;19(1):27-35 PMID: 7357604
  8. A tRNA gene of Xenopus laevis contains at least two sites promoting transcription.
    Nucleic Acids Res. 1979 Dec 11;7(7):1749-63 PMID: 537910
  9. Specific interaction of a purified transcription factor with an internal control region of 5S RNA genes.
    Cell. 1980 Mar;19(3):717-28 PMID: 6153931
  10. Analysis of a drosophila tRNA gene cluster.
    Cell. 1980 Apr;19(4):889-95 PMID: 6769590
  11. Nonchromosomal antibiotic resistance in bacteria: genetic transformation of Escherichia coli by R-factor DNA.
    Proc Natl Acad Sci U S A. 1972 Aug;69(8):2110-4 PMID: 4559594
  12. Ligation of EcoRI endonuclease-generated DNA fragments into linear and circular structures.
    J Mol Biol. 1975 Jul 25;96(1):171-84 PMID: 169355
  13. Colony hybridization: a method for the isolation of cloned DNAs that contain a specific gene.
    Proc Natl Acad Sci U S A. 1975 Oct;72(10):3961-5 PMID: 1105573
  14. A new method for sequencing DNA.
    Proc Natl Acad Sci U S A. 1977 Feb;74(2):560-4 PMID: 265521
  15. Nucleotide sequence of a mutant eukaryotic gene: the yeast tyrosine-inserting ochre suppressor SUP4-o.
    Proc Natl Acad Sci U S A. 1977 Dec;74(12):5453-7 PMID: 341157
  16. Structure of yeast phenylalanine-tRNA genes: an intervening DNA segment within the region coding for the tRNA.
    Proc Natl Acad Sci U S A. 1978 Jan;75(1):190-4 PMID: 343104
  17. Cloned single repeating units of 5S DNA direct accurate transcription of 5S RNA when injected into Xenopus oocytes.
    Proc Natl Acad Sci U S A. 1978 Jun;75(6):2849-53 PMID: 275856
  18. A nuclear extract of Xenopus laevis oocytes that accurately transcribes 5S RNA genes.
    Cell. 1978 Nov;15(3):1077-86 PMID: 569551
  19. Nucleotide sequence of Xenopus borealis oocyte 5S DNA: comparison of sequences that flank several related eucaryotic genes.
    Cell. 1978 Dec;15(4):1145-56 PMID: 264240
  20. Transcription and processing of cloned yeast tyrosine tRNA genes microinjected into frog oocytes.
    Nature. 1979 Mar 8;278(5700):137-43 PMID: 368655
  21. Specific transcription of eukaryotic tRNA genes in Xenopus germinal vesicle extracts.
    Proc Natl Acad Sci U S A. 1978 Oct;75(10):4819-23 PMID: 105357
  22. Deletion mutants of Xenopus laevis 5S ribosomal DNA.
    Cell. 1979 Mar;16(3):551-63 PMID: 455442
  23. In vitro transcription and processing of a yeast tRNA gene containing an intervening sequence.
    Cell. 1979 Jun;17(2):399-406 PMID: 378410
  24. Delimitation of a promoter for RNA polymerase III by means of a functional test.
    Proc Natl Acad Sci U S A. 1979 Jun;76(6):2590-4 PMID: 288049
Article Info
Journal
Proceedings of the National Academy of Sciences of the United States of America
Abbr.
Proc Natl Acad Sci U S A
ISSN
0027-8424
Published
1980-06-00
Pages
3365-8
Language
English
Region
United States
NLM ID
7505876
PMCID
PMC349616
Subset
IM
Databases
GENBANK
J01141, J01151
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