Home LiteratureArticle Details
PMID: 6427178 Published · ppublish English Journal Article

Replacement of the Bacillus subtilis subtilisin structural gene with an In vitro-derived deletion mutation.

Journal of bacteriology ·Vol. 158 ·No. 2 ·1984-05-00 ·Pages 411-8

Stahl ML, Ferrari E

Abstract

The entire subtilisin structural gene from Bacillus subtilis I168 has been cloned, and its nucleotide sequence has been determined. When expressed on a high-copy-number shuttle vector, a fivefold increase in serine protease activity was observed. The DNA sequence of the gene is 80% homologous to the Bacillus amyloliquefaciens subtilisin structural gene, and the translated mature coding sequence is 85% homologous to the published protein sequence of subtilisin BPN'. The chloramphenicol resistance determinant of a plasmid integrated at the subtilisin locus was mapped by PBS1 transduction and was found to be linked to glyB (83%) and argC (60%), but not with metC or purB . The chromosomal locus containing the wild-type subtilisin allele was replaced with an in vitro-derived allele of the gene (delta apr-684) that contained a 684-base-pair deletion. The technique used for introducing the deletion is a variation of the gene replacement methods used in Saccharomyces cerevisiae and Escherichia coli. When used in B. subtilis, deletion mutants could be directly screened among the transformants. Physiological characterization of the delta apr-684 mutation revealed no discernable effect on the formation of heat-resistant endospores, but strains carrying the mutation produced only 10% of wild-type serine protease activity. A model is presented that outlines the pathway for plasmid integration and deletion formation in B. subtilis.

MeSH Terms
Bacillus subtilis/enzymology,genetics,physiology Base Sequence Chromosome Deletion Chromosome Mapping Chromosomes, Bacterial Cloning, Molecular DNA, Recombinant Endopeptidases/metabolism Genes Genes, Bacterial Models, Genetic Mutation Serine Endopeptidases Spores, Bacterial/physiology Subtilisins/genetics Transduction, Genetic Transformation, Bacterial
Chemicals
DNA, Recombinant Endopeptidases Serine Endopeptidases Subtilisins
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Stahl M L
Ferrari E
References (43)
43 references, click to expand
  1. Replacement of chromosome segments with altered DNA sequences constructed in vitro.
    Proc Natl Acad Sci U S A. 1979 Oct;76(10):4951-5 PMID: 388424
  2. Early sporulation gene spo0F: nucleotide sequence and analysis of gene product.
    Proc Natl Acad Sci U S A. 1983 Feb;80(3):658-62 PMID: 6402773
  3. Regulatory sequences involved in the promotion and termination of RNA transcription.
    Annu Rev Genet. 1979;13:319-53 PMID: 94251
  4. Labeling deoxyribonucleic acid to high specific activity in vitro by nick translation with DNA polymerase I.
    J Mol Biol. 1977 Jun 15;113(1):237-51 PMID: 881736
  5. REQUIREMENTS FOR TRANSFORMATION IN BACILLUS SUBTILIS.
    J Bacteriol. 1961 May;81(5):741-6 PMID: 16561900
  6. Construction and properties of an integrable plasmid for Bacillus subtilis.
    J Bacteriol. 1983 Jun;154(3):1513-5 PMID: 6304019
  7. Translational initiation in prokaryotes.
    Annu Rev Microbiol. 1981;35:365-403 PMID: 6170248
  8. Nucleotide sequences of transcription and translation initiation regions in Bacillus phage phi 29 early genes.
    J Biol Chem. 1982 Jan 25;257(2):1053-62 PMID: 6274853
  9. The subtilisin E gene of Bacillus subtilis is transcribed from a sigma 37 promoter in vivo.
    Proc Natl Acad Sci U S A. 1984 Feb;81(4):1184-8 PMID: 6322190
  10. Transformation and transduction in recombination-defective mutants of Bacillus subtilis.
    J Bacteriol. 1967 Jun;93(6):1925-37 PMID: 4960898
  11. Bacillus subtilis requires a "stringent" Shine-Dalgarno region for gene expression.
    DNA. 1984;3(1):17-21 PMID: 6199171
  12. Prolonged incubation in calcium chloride improves the competence of Escherichia coli cells.
    Gene. 1979 May;6(1):23-8 PMID: 383576
  13. Intracellular serine protease of Bacillus subtilis: sequence homology with extracellular subtilisins.
    J Bacteriol. 1978 Mar;133(3):1401-11 PMID: 25266
  14. The isolation of structural genes from libraries of eucaryotic DNA.
    Cell. 1978 Oct;15(2):687-701 PMID: 719759
  15. Complete sequence of bovine mitochondrial DNA. Conserved features of the mammalian mitochondrial genome.
    J Mol Biol. 1982 Apr 25;156(4):683-717 PMID: 7120390
  16. [Characterization of 2 endopeptidases excreted by B. subtilis Marburg during sporulation].
    Bull Soc Chim Biol (Paris). 1969 Jul 25;51(3):457-69 PMID: 4982276
  17. A new pair of M13 vectors for selecting either DNA strand of double-digest restriction fragments.
    Gene. 1982 Oct;19(3):269-76 PMID: 6295880
  18. Cloning, sequencing, and secretion of Bacillus amyloliquefaciens subtilisin in Bacillus subtilis.
    Nucleic Acids Res. 1983 Nov 25;11(22):7911-25 PMID: 6316278
  19. Characterization of proteinases excreted by Bacillus subtilis Marburg strain during sporulation.
    J Appl Bacteriol. 1970 Mar;33(1):207-19 PMID: 4986703
  20. Analysis of a Bacillus subtilis proteinase mutant.
    J Bacteriol. 1972 Feb;109(2):575-83 PMID: 4621679
  21. Lethal disruption of the yeast actin gene by integrative DNA transformation.
    Science. 1982 Jul 23;217(4557):371-3 PMID: 7046050
  22. Genetics of bacterial sporulation.
    Adv Genet. 1976;18:69-98 PMID: 821319
  23. Detection of specific sequences among DNA fragments separated by gel electrophoresis.
    J Mol Biol. 1975 Nov 5;98(3):503-17 PMID: 1195397
  24. Improved estimation of secondary structure in ribonucleic acids.
    Nat New Biol. 1973 Nov 14;246(150):40-1 PMID: 4519026
  25. DNA sequencing with chain-terminating inhibitors.
    Proc Natl Acad Sci U S A. 1977 Dec;74(12):5463-7 PMID: 271968
  26. Chromosomal location of a Bacillus subtilis DNA fragment uniquely transcribed by sigma-28-containing RNA polymerase.
    J Bacteriol. 1982 Nov;152(2):780-5 PMID: 6290451
  27. Unique features in the ribosome binding site sequence of the gram-positive Staphylococcus aureus beta-lactamase gene.
    J Biol Chem. 1981 Nov 10;256(21):11283-91 PMID: 6793593
  28. A rapid alkaline extraction procedure for screening recombinant plasmid DNA.
    Nucleic Acids Res. 1979 Nov 24;7(6):1513-23 PMID: 388356
  29. Initiation factor-independent translation of mRNAs from Gram-positive bacteria.
    Proc Natl Acad Sci U S A. 1981 Aug;78(8):4912-6 PMID: 6795625
  30. The 3'-terminal sequence of Escherichia coli 16S ribosomal RNA: complementarity to nonsense triplets and ribosome binding sites.
    Proc Natl Acad Sci U S A. 1974 Apr;71(4):1342-6 PMID: 4598299
  31. Genetic aspects of bacterial endospore formation.
    Bacteriol Rev. 1976 Dec;40(4):908-62 PMID: 12736
  32. Replacement and amplification of bacterial genes with sequences altered in vitro.
    Proc Natl Acad Sci U S A. 1983 Aug;80(16):4894-8 PMID: 6308658
  33. Efficient transfer of large DNA fragments from agarose gels to diazobenzyloxymethyl-paper and rapid hybridization by using dextran sulfate.
    Proc Natl Acad Sci U S A. 1979 Aug;76(8):3683-7 PMID: 291033
  34. Bacillopeptidase F: two forms of a glycoprotein serine protease from Bacillus subtilis 168.
    J Bacteriol. 1983 Jul;155(1):145-52 PMID: 6408058
  35. Nucleotide sequence of the amylase gene from Bacillus subtilis.
    Nucleic Acids Res. 1983 Jan 25;11(2):237-49 PMID: 6186986
  36. Thermosensitive, extracellular neutral proteases in Bacillus subtilis: isolation, characterization, and genetics.
    J Bacteriol. 1979 Aug;139(2):583-90 PMID: 37241
  37. Physiological studies on early-blocked sporulation mutants of Bacillus subtilis.
    J Appl Bacteriol. 1970 Mar;33(1):220-7 PMID: 4986704
  38. The relationship of serine protease activity to RNA polymerase modification and sporulation in Bacillus subtilis.
    J Mol Biol. 1973 May 5;76(1):103-22 PMID: 4198065
  39. A putative signal peptidase recognition site and sequence in eukaryotic and prokaryotic signal peptides.
    J Mol Biol. 1983 Jun 25;167(2):391-409 PMID: 6345794
  40. Two RNA polymerase sigma factors from Bacillus subtilis discriminate between overlapping promoters for a developmentally regulated gene.
    Nature. 1983 Apr 28;302(5911):800-4 PMID: 6405278
  41. A sensitive new substrate for chymotrypsin.
    Anal Biochem. 1979 Nov 1;99(2):316-20 PMID: 574722
  42. The stability of messenger ribonucleic acid during sporulation in Bacillus subtilis.
    J Biol Chem. 1971 May 25;246(10):3189-95 PMID: 4995746
  43. Mapping a cloned gene under sporulation control by inserttion of a drug resistance marker into the Bacillus subtilis chromosome.
    J Bacteriol. 1980 Apr;142(1):90-8 PMID: 6768719
Article Info
Journal
Journal of bacteriology
Abbr.
J Bacteriol
ISSN
0021-9193
Published
1984-05-00
Pages
411-8
Language
English
Region
United States
NLM ID
2985120R
PMCID
PMC215443
Subset
IM
Databases
GENBANK
K01988
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com