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PMID: 6329679 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

A rapid and efficient method for region- and strand-specific mutagenesis of cloned DNA.

The EMBO journal ·Vol. 1 ·No. 4 ·1982-00-00 ·Pages 433-7

Everett RD, Chambon P

Abstract

The single-stranded viral DNA of an M13 phage recombinant containing the early promoter region of SV40 was hybridized with linear, double-stranded replicative form DNA of a related M13 phage containing a short deletion in the cloned SV40 sequence. The heteroduplexes formed between these DNA molecules contained a short, defined single-stranded region in an otherwise duplex molecule. These heteroduplexes were treated with sodium bisulphite to deaminate exposed unpaired cytosines to uracil residues. The single-stranded region was filled in with DNA polymerase I, which incorporates adenine opposite the mutated uracils, and the DNA then transfected into the M13 host JM103 . Viral DNA from the resultant plaques was used for the rapid dideoxy-DNA sequencing procedure; all of the plaques studied contained point mutations within the desired area. This method allows the very rapid and efficient generation of region-directed point mutants which can be quickly sequenced.

MeSH Terms
Base Sequence Cloning, Molecular Coliphages/genetics DNA/metabolism DNA Restriction Enzymes DNA, Single-Stranded/genetics Escherichia coli/genetics Mutation
Chemicals
DNA, Single-Stranded DNA DNA Restriction Enzymes
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Everett R D
Chambon P
References (19)
19 references, click to expand
  1. Local mutagenesis: a method for generating viral mutants with base substitutions in preselected regions of the viral genome.
    Proc Natl Acad Sci U S A. 1978 May;75(5):2170-4 PMID: 209457
  2. Uracil incorporation: a source of pulse-labeled DNA fragments in the replication of the Escherichia coli chromosome.
    Proc Natl Acad Sci U S A. 1978 Jan;75(1):233-7 PMID: 203931
  3. Site-directed mutagenesis in DNA: generation of point mutations in cloned beta globin complementary dna at the positions corresponding to amino acids 121 to 123.
    J Mol Biol. 1978 Sep 15;124(2):343-58 PMID: 712841
  4. Prolonged incubation in calcium chloride improves the competence of Escherichia coli cells.
    Gene. 1979 May;6(1):23-8 PMID: 383576
  5. Regulatory mutants of simian virus 40: constructed mutants with base substitutions at the origin of DNA replication.
    J Mol Biol. 1979 Jul 15;131(4):801-17 PMID: 229233
  6. Cold-sensitive regulatory mutants of simian virus 40.
    J Mol Biol. 1980 Jun 15;140(1):129-42 PMID: 6251230
  7. Deletions covering the putative promoter region of early mRNAs of simian virus 40 do not abolish T-antigen expression.
    Proc Natl Acad Sci U S A. 1980 Jul;77(7):3865-9 PMID: 6253995
  8. Segment-directed mutagenesis: construction in vitro of point mutations limited to a small predetermined region of a circular DNA molecule.
    Proc Natl Acad Sci U S A. 1980 Sep;77(9):5375-9 PMID: 6254078
  9. A system for shotgun DNA sequencing.
    Nucleic Acids Res. 1981 Jan 24;9(2):309-21 PMID: 6259625
  10. Cloning in single-stranded bacteriophage as an aid to rapid DNA sequencing.
    J Mol Biol. 1980 Oct 25;143(2):161-78 PMID: 6260957
  11. Specific in vitro transcription of conalbumin gene is drastically decreased by single-point mutation in T-A-T-A box homology sequence.
    Proc Natl Acad Sci U S A. 1980 Dec;77(12):7024-8 PMID: 6938951
  12. A reliable method for the recovery of DNA fragments from agarose and acrylamide gels.
    Anal Biochem. 1981 Apr;112(2):295-8 PMID: 6266279
  13. The SV40 72 base repair repeat has a striking effect on gene expression both in SV40 and other chimeric recombinants.
    Nucleic Acids Res. 1981 Nov 25;9(22):6047-68 PMID: 6273820
  14. Region- and strand-specific mutagensis of a recombinant plasmid.
    Gene. 1981 Dec;15(4):331-42 PMID: 6277737
  15. The effect of bisulfite modification on the template activity of DNA for DNA polymerase I.
    Nucleic Acids Res. 1974 Jul;1(7):889-99 PMID: 10793721
  16. Properties of a supercoiled deoxyribonucleic acid-protein relaxation complex and strand specificity of the relaxation event.
    Biochemistry. 1970 Oct 27;9(22):4428-40 PMID: 4919547
  17. Nucleic acid reactivity and conformation. II. Reaction of cytosine and uracil with sodium bisulfite.
    J Biol Chem. 1973 Jun 10;248(11):4060-4 PMID: 4736082
  18. Induction and isolation of mutants in a specific region of gene A of bacteriophage phi chi 174.
    Virology. 1976 Mar;70(1):195-7 PMID: 769308
  19. Mutagenesis at a specific position in a DNA sequence.
    J Biol Chem. 1978 Sep 25;253(18):6551-60 PMID: 681366
Article Info
Journal
The EMBO journal
Abbr.
EMBO J
ISSN
0261-4189
Published
1982-00-00
Pages
433-7
Language
English
Region
England
NLM ID
8208664
PMCID
PMC553064
Subset
IM
Databases
GENBANK
M24175, M24176, M24177
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