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PMID: 6304717 Published · ppublish English Journal Article Research Support, U.S. Gov't, P.H.S.

Regulation of human ribosomal RNA transcription.

Learned RM, Smale ST, Haltiner MM, Tjian R

Abstract

We have used a cell-free polymerase I transcription system derived from HeLa cells to study the regulation of human rRNA synthesis. Analysis of deletion mutants spanning the start site of transcription at nucleotide +1 indicates that the control region affecting initiation of human rRNA synthesis is contained within sequences from nucleotides -158 to +18. This promoter region can be subdivided into (i) a central segment of approximately 40 base pair that is required for transcription and (ii) flanking sequences that influence the efficiency of transcription in vitro. We have examined the in vitro transcriptional activity of the human extract under various conditions that are thought to modulate rRNA synthesis in vivo. Cell-free extracts prepared from HeLa cells infected with adenovirus 2 synthesize human rRNA at levels greatly decreased relative to uninfected cell extracts. By contrast, in vitro transcription of human rRNA is stimulated 2- to 3-fold by the addition of purified simian virus 40 large tumor antigen to the transcription reaction. Moreover, a mutant tumor antigen known to be defective for rRNA activation in vivo is incapable of stimulating rRNA synthesis in vitro. The ability to detect these different regulatory phenomena in vitro provides us with an experimental basis for investigating the molecular mechanisms that control rRNA synthesis.

MeSH Terms
Cell Transformation, Neoplastic DNA Polymerase I/metabolism DNA Polymerase II/metabolism DNA, Recombinant/metabolism DNA-Directed DNA Polymerase/metabolism HeLa Cells/enzymology Humans Kinetics Plasmids RNA, Ribosomal/genetics Simian virus 40/genetics Transcription, Genetic
Chemicals
DNA, Recombinant RNA, Ribosomal DNA Polymerase I DNA Polymerase II DNA-Directed DNA Polymerase
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Learned R M
Smale S T
Haltiner M M
Tjian R
References (38)
38 references, click to expand
  1. Selective extraction of polyoma DNA from infected mouse cell cultures.
    J Mol Biol. 1967 Jun 14;26(2):365-9 PMID: 4291934
  2. Nucleic acid synthesis in HeLa cells infected with Shope fibroma virus.
    Virology. 1967 Sep;33(1):77-83 PMID: 6039965
  3. "Rescued" SV40: increased transforming efficiency in mouse and human cells.
    Proc Natl Acad Sci U S A. 1969 Apr;62(4):1031-7 PMID: 4307871
  4. Ribonucleic acid synthesis in cells infected with herpes simplex virus. I. Patterns of ribonucleic acid synthesis in productively infected cells.
    J Virol. 1969 Jul;4(1):36-46 PMID: 4308689
  5. Biochemical studies on adenovirus multiplication. XVII. Ribosome synthesis in uninfected and infected KB cells.
    Virology. 1970 Apr;40(4):893-902 PMID: 5432282
  6. Virus-specific ribonucleic acid synthesis in KB cells infected with herpes simplex virus.
    J Virol. 1967 Jun;1(3):583-90 PMID: 4318959
  7. "Pleiotypic response".
    Nat New Biol. 1971 Aug;232(33):206-11 PMID: 5285753
  8. Uterine ribonucleic acid polymerase. Effect of estrogen on nucleotide incorporation into 3' chain termini.
    Biochemistry. 1971 Jun 8;10(12):2384-90 PMID: 5114997
  9. Amount of viral DNA in the genome of cells transformed by adenovirus type 2.
    J Mol Biol. 1973 Jan;73(1):125-30 PMID: 4734785
  10. Mammalian deoxyribonucleic acid-dependent ribonucleic acid polymerases. I. Purification and properties of an -amanitin-sensitive ribonucleic acid polymerase and stimulatory factors from HeLa and KB cells.
    J Biol Chem. 1973 Jun 10;248(11):3777-88 PMID: 4708091
  11. Isolation and partial characterization of the multiple forms of deoxyribonucleic acid-dependent ribonucleic acid polymerase in the mouse myeloma, MOPC 315.
    J Biol Chem. 1974 Sep 25;249(18):5889-97 PMID: 4414007
  12. RNA synthesis and processing in adenovirus-infected cells.
    Cold Spring Harb Symp Quant Biol. 1975;39 Pt 1:447-56 PMID: 1057473
  13. Amino acid starvation affects the initiation frequency of nucleolar RNA polymerase.
    Cell. 1976 Mar;7(3):439-45 PMID: 947551
  14. Stimulation of cellular RNA synthesis in mouse-kidney cell cultures infected with SV40 virus.
    Exp Cell Res. 1976 Jul;100(2):433-6 PMID: 181260
  15. Polyoma-induced stimulation of cellular RNA synthesis is paralleled by changed expression of the viral genome.
    Nucleic Acids Res. 1977;4(5):1483-503 PMID: 197491
  16. The binding site on SV40 DNA for a T antigen-related protein.
    Cell. 1978 Jan;13(1):165-79 PMID: 202398
  17. Stimulation of ribosomal RNA synthesis in isolated nuclei and nucleoli by partially purified preparations of SV40 T antigen.
    Cold Spring Harb Symp Quant Biol. 1978;42 Pt 2:685-91 PMID: 209933
  18. Reactivation of silent rRNA genes by simian virus 40 in human-mouse hybrid cells.
    Proc Natl Acad Sci U S A. 1979 Aug;76(8):3885-9 PMID: 226986
  19. Sequencing end-labeled DNA with base-specific chemical cleavages.
    Methods Enzymol. 1980;65(1):499-560 PMID: 6246368
  20. Regulation of simian virus 40 early transcription in vitro by a purified tumor antigen.
    Proc Natl Acad Sci U S A. 1980 Oct;77(10):5706-10 PMID: 6255460
  21. Identification of an SV40 DNA sequence related to the reactivation of silent rRNA genes in human greater than mouse hybrid cells.
    Virology. 1981 Feb;109(1):127-36 PMID: 6258304
  22. A rapid boiling method for the preparation of bacterial plasmids.
    Anal Biochem. 1981 Jun;114(1):193-7 PMID: 6269464
  23. SV40 gene expression is modulated by the cooperative binding of T antigen to DNA.
    Cell. 1981 Aug;25(2):373-84 PMID: 6269743
  24. Mapping of a mouse ribosomal DNA promoter by in vitro transcription.
    Nucleic Acids Res. 1981 Nov 25;9(22):6093-102 PMID: 6273823
  25. In vitro transcription of adenovirus.
    J Virol. 1981 Dec;40(3):703-19 PMID: 7321101
  26. Transcription of mouse rRNA genes by RNA polymerase I: in vitro and in vivo initiation and processing sites.
    Cell. 1981 Nov;27(1 Pt 2):165-74 PMID: 7326749
  27. In vitro transcription of a cloned mouse ribosomal RNA gene.
    Nucleic Acids Res. 1981 Dec 21;9(24):6773-85 PMID: 6278446
  28. Human ribosomal RNA gene: nucleotide sequence of the transcription initiation region and comparison of three mammalian genes.
    Proc Natl Acad Sci U S A. 1982 May;79(10):3092-6 PMID: 6954460
  29. Identification of the in vivo and in vitro origin of transcription in human rDNA.
    Nucleic Acids Res. 1982 Jul 10;10(13):3933-49 PMID: 6287426
  30. Nontranscribed spacer sequences promote in vitro transcription of Drosophila ribosomal DNA.
    Nucleic Acids Res. 1982 Nov 11;10(21):6879-86 PMID: 6817304
  31. Nucleotide sequence requirements for specific initiation of transcription by RNA polymerase I.
    Proc Natl Acad Sci U S A. 1982 Nov;79(22):6908-11 PMID: 6294665
  32. In vitro transcription of human ribosomal RNA genes by RNA polymerase I.
    J Mol Appl Genet. 1982;1(6):575-84 PMID: 7153690
  33. Mutational analysis of simian virus 40 T antigen: isolation and characterization of mutants with deletions in the T-antigen gene.
    Mol Cell Biol. 1983 Feb;3(2):203-13 PMID: 6300656
  34. Mutational analysis of simian virus 40 T antigen: stimulation of cellular DNA synthesis and activation of rRNA genes by mutants with deletions in the T-antigen gene.
    Mol Cell Biol. 1983 Feb;3(2):214-9 PMID: 6300657
  35. Biochemical activities of T-antigen proteins encoded by simian virus 40 A gene deletion mutants.
    Mol Cell Biol. 1983 Feb;3(2):220-8 PMID: 6300658
  36. Early events in poliovirus infection.
    Cold Spring Harb Symp Quant Biol. 1962;27:149-58 PMID: 14025140
  37. THE SYNTHESIS OF A DNA-LIKE RNA IN THE CYTOPLASM OF HELA CELLS INFECTED WITH VACCINIA VIRUS.
    J Mol Biol. 1964 Mar;8:405-16 PMID: 14168694
  38. Phytohemagglutinin: an initiator of mitosis in cultures of normal human leukocytes.
    Cancer Res. 1960 May;20:462-6 PMID: 14427849
Article Info
Journal
Proceedings of the National Academy of Sciences of the United States of America
Abbr.
Proc Natl Acad Sci U S A
ISSN
0027-8424
Published
1983-06-00
Pages
3558-62
Language
English
Region
United States
NLM ID
7505876
PMCID
PMC394088
Subset
IM
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