Home LiteratureArticle Details
PMID: 6281464 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, P.H.S.

The leader sequence of the subgenomic mRNA's of Rous sarcoma virus is approximately 390 nucleotides.

Journal of virology ·Vol. 41 ·No. 2 ·1982-02-00 ·Pages 527-34

Hackett PB, Swanstrom R, Varmus HE, Bishop JM

Abstract

The subgenomic mRNA's of Rous sarcoma virus share a common 5' leader sequence spliced from genomic RNA. We have examined the 5' terminal sequences of four Rous sarcoma virus RNAs: virion RNA and three species of intracellular mRNA which direct the synthesis of the RSV gene products. The lengths of the leaders on the RNAs were determined by the extent that they could protect cloned Rous sarcoma virus DNA fragments from S1 nuclease digestion after RNA-DNA hybridization. We found that the subgenomic mRNA's that direct the synthesis of the env and src gene products have uninterrupted spliced leader sequences of approximately 390 nucleotides, whereas virion RNA and full-length intracellular viral RNA have 5' termini homologous to the cloned viral DNA probe over at least the first 735 bases. In the accompanying manuscript we have determined the nucleotide sequence of the 5' end of the Rous sarcoma virus genome, including the candidate splice donor site identified here (Swanstrom et al., J. Virol. 41:535-541, 1982).

MeSH Terms
Avian Sarcoma Viruses/genetics Base Sequence Genes Molecular Weight RNA Splicing RNA, Messenger/genetics RNA, Viral/genetics Viral Envelope Proteins Viral Proteins/genetics
Chemicals
RNA, Messenger RNA, Viral Viral Envelope Proteins Viral Proteins
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Hackett P B
Swanstrom R
Varmus H E
Bishop J M
References (46)
46 references, click to expand
  1. The low molecular weight RNAs of Rous sarcoma virus. I. The 4 S RNA.
    Virology. 1970 Sep;42(1):182-95 PMID: 4318979
  2. Translation of Rous sarcoma virus RNA in a cell-free system from ascites Krebs II cells.
    Proc Natl Acad Sci U S A. 1975 Feb;72(2):614-8 PMID: 164661
  3. Cell-free translation of virion RNA from nondefective and transformation-defective Rous sarcoma viruses.
    J Virol. 1976 Sep;19(3):950-67 PMID: 184305
  4. Functional expression of cloned yeast DNA in Escherichia coli.
    Proc Natl Acad Sci U S A. 1977 Feb;74(2):487-91 PMID: 322128
  5. Microinjection analysis of envelope-glycoprotein messenger activities of avian leukosis viral RNAs.
    Proc Natl Acad Sci U S A. 1977 Apr;74(4):1614-8 PMID: 193109
  6. The size of Rous sarcoma virus mRNAs active in cell-free translation.
    Nature. 1977 Aug 4;268(5619):416-20 PMID: 197417
  7. Rates of formation and thermal stabilities of RNA:DNA and DNA:DNA duplexes at high concentrations of formamide.
    Nucleic Acids Res. 1977;4(5):1539-52 PMID: 19730
  8. Size and genetic content of viral RNAs in avian oncovirus-infected cells.
    J Virol. 1977 Oct;24(1):47-63 PMID: 198585
  9. Expression in Escherichia coli K-12 of the structural gene for catabolic dehydroquinase of Neurospora crassa.
    Proc Natl Acad Sci U S A. 1977 Aug;74(8):3508-12 PMID: 143663
  10. Translation of 35S and of subgenomic regions of avian sarcoma virus RNA.
    Proc Natl Acad Sci U S A. 1977 Oct;74(10):4661-5 PMID: 200926
  11. Analysis of single- and double-stranded nucleic acids on polyacrylamide and agarose gels by using glyoxal and acridine orange.
    Proc Natl Acad Sci U S A. 1977 Nov;74(11):4835-8 PMID: 73185
  12. Cell-free synthesis of the precursor polypeptide for avian myeloblastosis virus DNA polymerase.
    Proc Natl Acad Sci U S A. 1977 Nov;74(11):4951-4 PMID: 200940
  13. Subgenomic, cellular Rous sarcoma virus RNAs contain oligonucleotides from the 3' half and the 5' terminus of virion RNA.
    Nature. 1977 Dec 15;270(5638):631-4 PMID: 201866
  14. The size and genetic composition of virus-specific RNAs in the cytoplasm of cells producing avian sarcoma-leukosis viruses.
    Cell. 1977 Dec;12(4):983-92 PMID: 202396
  15. A joint produce of the genes gag and pol of avian sarcoma virus: a possible precursor of reverse transcriptase.
    Cell. 1977 Dec;12(4):993-1005 PMID: 74287
  16. Production of a functional eukaryotic enzyme in Escherichia coli: cloning and expression of the yeast structural gene for imidazole-glycerolphosphate dehydratase (his3).
    Proc Natl Acad Sci U S A. 1977 Dec;74(12):5255-9 PMID: 341150
  17. The use of thin acrylamide gels for DNA sequencing.
    FEBS Lett. 1978 Mar 1;87(1):107-10 PMID: 631324
  18. Spliced early mRNAs of simian virus 40.
    Proc Natl Acad Sci U S A. 1978 Mar;75(3):1274-8 PMID: 206891
  19. Evidence for splicing of avian sarcoma virus 5'-terminal genomic sequences into viral-specific RNA in infected cells.
    Proc Natl Acad Sci U S A. 1978 Mar;75(3):1284-8 PMID: 206893
  20. Identification of a polypeptide encoded by the avian sarcoma virus src gene.
    Proc Natl Acad Sci U S A. 1978 Mar;75(3):1567-71 PMID: 206909
  21. Peptide analysis of the transformation-specific antigen from avian sarcoma virus-transformed cells.
    J Virol. 1978 Jun;26(3):773-82 PMID: 209218
  22. Retroviruses.
    Annu Rev Biochem. 1978;47:35-88 PMID: 354499
  23. At least 104 nucleotides are transposed from the 5' terminus of the avian sarcoma virus genome to the 5' termini of smaller viral mRNAs.
    Cell. 1978 Sep;15(1):79-91 PMID: 212200
  24. Cell-free translation of avian sarcoma virus RNA: suppression of the gag termination codon does not augment synthesis of the joint gag/pol product.
    Cell. 1978 Oct;15(2):607-14 PMID: 214247
  25. Implications of RNA-RNA splicing in evolution of eukaryotic cells.
    Science. 1978 Dec 22;202(4374):1257-60 PMID: 364651
  26. How do eucaryotic ribosomes select initiation regions in messenger RNA?
    Cell. 1978 Dec;15(4):1109-23 PMID: 215319
  27. The NH2-terminal sequence of the avian oncovirus gag precursor polyprotein (Pr76gag).
    Virology. 1978 Dec;91(2):423-33 PMID: 217156
  28. Segments of simian virus 40 DNA spanning most of the leader sequence of the major late viral messenger RNA are dispensable.
    Proc Natl Acad Sci U S A. 1979 Jun;76(6):2556-60 PMID: 223148
  29. Virus-specific messenger RNAs in permissive cells infected by avian sarcoma virus.
    J Biol Chem. 1979 Aug 25;254(16):8015-22 PMID: 224042
  30. Histone genes and histone messengers.
    Annu Rev Biochem. 1979;48:837-70 PMID: 112914
  31. Evidence for the identity of shared 5'-terminal sequences between genome RNA and subgenomic mRNA's of B77 avian sarcoma virus.
    J Virol. 1979 Nov;32(2):536-45 PMID: 228077
  32. Splicing as a requirement for biogenesis of functional 16S mRNA of simian virus 40.
    Proc Natl Acad Sci U S A. 1979 Sep;76(9):4317-21 PMID: 228296
  33. Mapping of RNA by a modification of the Berk-Sharp procedure: the 5' termini of 15 S beta-globin mRNA precursor and mature 10 s beta-globin mRNA have identical map coordinates.
    Nucleic Acids Res. 1979 Nov 10;7(5):1175-93 PMID: 390497
  34. Splicing and the formation of stable RNA.
    Cell. 1979 Dec;18(4):1299-302 PMID: 229971
  35. The gene for polypeptide IX of adenovirus type 2 and its unspliced messenger RNA.
    Cell. 1980 Mar;19(3):671-81 PMID: 6985473
  36. env Gene of Rous sarcoma virus: identification of the gene product by cell-free translation.
    J Virol. 1980 Mar;33(3):993-1003 PMID: 6245279
  37. Sequencing end-labeled DNA with base-specific chemical cleavages.
    Methods Enzymol. 1980;65(1):499-560 PMID: 6246368
  38. Identification of regulatory sequences in the prelude sequences of an H2A histone gene by the study of specific deletion mutants in vivo.
    Proc Natl Acad Sci U S A. 1980 Mar;77(3):1432-6 PMID: 6929494
  39. A versatile primer for DNA sequencing in the M13mp2 cloning system.
    Gene. 1980 Jun;10(1):69-73 PMID: 6250947
  40. Sites of synthesis of viral proteins in avian sarcoma virus-infected chicken cells.
    J Virol. 1980 Sep;35(3):629-36 PMID: 6252329
  41. Definition of a novel promoter for the major adenovirus-associated virus mRNA.
    Cell. 1980 Nov;22(1 Pt 1):231-42 PMID: 6253077
  42. Nucleotide sequence of an avian sarcoma virus oncogene (src) and proposed amino acid sequence for gene product.
    Nature. 1980 Sep 18;287(5779):198-203 PMID: 6253794
  43. Molecular cloning and characterization of avian sarcoma virus circular DNA molecules.
    J Virol. 1980 Oct;36(1):50-61 PMID: 6255214
  44. The genesis of Rous sarcoma virus messenger RNAs.
    Virology. 1981 Jul 30;112(2):714-28 PMID: 6266148
  45. Retroviruses as mutagens: insertion and excision of a nontransforming provirus alter expression of a resident transforming provirus.
    Cell. 1981 Jul;25(1):23-36 PMID: 6268304
  46. Nucleotide sequence of the 5' noncoding region and part of the gag gene of Rous sarcoma virus.
    J Virol. 1982 Feb;41(2):535-41 PMID: 6281465
Article Info
Journal
Journal of virology
Abbr.
J Virol
ISSN
0022-538X
Published
1982-02-00
Pages
527-34
Language
English
Region
United States
NLM ID
0113724
PMCID
PMC256781
Subset
IM
Grants
NCI NIH HHS · 1T32 CA 09043 · United States
NCI NIH HHS · CA 12705 · United States
NCI NIH HHS · CA 19287 · United States
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com