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PMID: 6278406 Published · ppublish English Journal Article

A flexible new computer program for handling DNA sequence data.

Nucleic acids research ·Vol. 10 ·No. 1 ·1982-01-11 ·Pages 229-36

Kröger M, Kröger-Block A

Abstract

A compact new computer program for handling nucleic acid sequence data is presented. It consists of a number of different subsets, which may be used according to a given code system. The program is designed for the determination of restriction enzyme and other recognition sites in correlation with translation patterns, and allows tabulation of codon frequencies and protein molecular weights within specified gene boundaries. The program is especially designed for detection of overlapping genes. The language, is FORTRAN and thus the program may be used on small computers; it may also be used without any prior computer experience. Copies are available on request.

MeSH Terms
Amino Acid Sequence Base Sequence Codon/genetics Computers DNA DNA Restriction Enzymes DNA, Single-Stranded Methods Molecular Weight Proteins/genetics
Chemicals
Codon DNA, Single-Stranded Proteins DNA DNA Restriction Enzymes
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Kröger M
Kröger-Block A
References (6)
6 references, click to expand
  1. Sequence data handling by computer.
    Nucleic Acids Res. 1977 Nov;4(11):4037-51 PMID: 593900
  2. The use of thin acrylamide gels for DNA sequencing.
    FEBS Lett. 1978 Mar 1;87(1):107-10 PMID: 631324
  3. Further procedures for sequence analysis by computer.
    Nucleic Acids Res. 1978 Mar;5(3):1013-6 PMID: 643613
  4. Regulatory sequences involved in the promotion and termination of RNA transcription.
    Annu Rev Genet. 1979;13:319-53 PMID: 94251
  5. Sequencing end-labeled DNA with base-specific chemical cleavages.
    Methods Enzymol. 1980;65(1):499-560 PMID: 6246368
  6. Coding capacity of complementary DNA strands.
    Nucleic Acids Res. 1981 Mar 25;9(6):1499-518 PMID: 7015290
Article Info
Journal
Nucleic acids research
Abbr.
Nucleic Acids Res
ISSN
0305-1048
Published
1982-01-11
Pages
229-36
Language
English
Region
England
NLM ID
0411011
PMCID
PMC326129
Subset
IM
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