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PMID: 6222284 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

The nucleotide sequence of Bacillus subtilis tRNA genes.

Nucleic acids research ·Vol. 11 ·No. 10 ·1983-05-25 ·Pages 3037-45

Yamada Y, Ohki M, Ishikura H

Abstract

Clones carring Bacillus subtilis tRNA genes were isolated from a lambda 816 library. A recombinant phage lambda 816-BS83 which was hybridized effectively with unfractionated tRNA probes contained a 3-kb fragment. By a Southern's blot analysis, it was found that tRNA genes were located in Eco RI-Hinc II region of this fragment. Sequence determination revealed the presence of a cluster of four tRNA genes in this region. The gene organization was as follows: tDNALys-9bp-tDNAGlu-81bp-tDNAAsp-30bp-tDNAPhe. The RNA sequences expected from tDNALys and tDNAPhe were identical with the reported RNA sequences. Two tRNA genes, tDNALys and tDNAAsp encoded the CCA sequence of 3'-terminal region, but the other two, tDNAGlu and tDNAPhe did not. A promoter-like sequence which corresponds to the sigma 55-recognition site was found in a region about 100bp upstream from tDNALys.

MeSH Terms
Bacillus subtilis/genetics Bacteriophage lambda/genetics Base Sequence Cloning, Molecular Genes Genes, Bacterial Nucleic Acid Conformation Nucleic Acid Hybridization RNA, Transfer/genetics Transcription, Genetic
Chemicals
RNA, Transfer
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Yamada Y
Ohki M
Ishikura H
References (11)
11 references, click to expand
  1. Calcium-dependent bacteriophage DNA infection.
    J Mol Biol. 1970 Oct 14;53(1):159-62 PMID: 4922220
  2. Small ribonucleic acids of Escherichia coli. I. Characterization by polyacrylamide gel electrophoresis and fingerprint analysis.
    J Biol Chem. 1973 Jul 25;248(14):5024-32 PMID: 4577761
  3. Degree of completion of 3'-terminus of transfer ribonucleic acids of Bacillus subtilis 168 at various developmental stages and asporogenous mutants.
    J Bacteriol. 1974 Mar;117(3):1361-2 PMID: 4205201
  4. Detection of specific sequences among DNA fragments separated by gel electrophoresis.
    J Mol Biol. 1975 Nov 5;98(3):503-17 PMID: 1195397
  5. The nucleotide sequence of phenylalanine tRNA from Bacillus subtilis.
    Nucleic Acids Res. 1977 Aug;4(8):2821-9 PMID: 410002
  6. Nucleotide sequence of a lysine tRNA from Bacillus subtilis.
    Nucleic Acids Res. 1977 Dec;4(12):4291-303 PMID: 414208
  7. Sequencing end-labeled DNA with base-specific chemical cleavages.
    Methods Enzymol. 1980;65(1):499-560 PMID: 6246368
  8. Cascades of Sigma factors.
    Cell. 1981 Sep;25(3):582-4 PMID: 6793235
  9. tRNA genes are found between 16S and 23S rRNA genes in Bacillus subtilis.
    Nucleic Acids Res. 1982 Mar 11;10(5):1607-24 PMID: 6280153
  10. Structure and organization of a cluster of sic tRNA genes in the space between tandem ribosomal RNA gene sets in Bacillus subtilis.
    J Biol Chem. 1983 Jan 10;258(1):291-8 PMID: 6294101
  11. Compilation of tRNA sequences.
    Nucleic Acids Res. 1983 Jan 11;11(1):r1-53 PMID: 6866759
Article Info
Journal
Nucleic acids research
Abbr.
Nucleic Acids Res
ISSN
0305-1048
Published
1983-05-25
Pages
3037-45
Language
English
Region
England
NLM ID
0411011
PMCID
PMC325946
Subset
IM
Databases
GENBANK
K00968
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