Home LiteratureArticle Details
PMID: 4403708 Published · ppublish English Journal Article

The binding of oxidized coenzymes by glutamate dehydrogenase and the effects of glutarate and purine nucleotides.

The Biochemical journal ·Vol. 126 ·No. 4 ·1972-02-00 ·Pages 975-84

Dalziel K, Egan RR

Abstract

1. The binding of NAD(+) and NADP(+) to glutamate dehydrogenase has been studied in sodium phosphate buffer, pH7.0, by equilibrium dialysis. Approximate values for the dissociation constants are 0.47 and 2.5mm respectively. For NAD(+) the value agrees with that estimated from initial-rate results. 2. In the presence of the substrate analogue glutarate both coenzymes are bound more firmly, and there is one active centre per enzyme subunit. The binding results cannot be described in terms of independent and identical active centres, and binding is stronger at low coenzyme concentrations than at high concentrations. Either the six subunits of the oligomer are not identical or there are negative interactions between them in the binding of coenzymes in ternary complexes with glutarate. The latter explanation is favoured. 3. The binding studies support the conclusions drawn from earlier kinetic studies of the glutamate reaction. 4. ADP and GTP respectively decrease and increase the affinity of the enzyme for NAD(+) and NADP(+), in both the presence and absence of glutarate. The negative binding interactions in the presence of glutarate are abolished by ADP, which decreases the affinity for the coenzymes at low concentrations of the latter. 5. In the presence of glutarate, GTP and NAD(+) or NADP(+), the association of enzyme oligomers is prevented, and the solubility of the enzyme is decreased; the complex of enzyme and ligands readily crystallizes. 6. The results are discussed in relation to earlier kinetic studies.

MeSH Terms
Adenosine Diphosphate Binding Sites Dialysis Glutamate Dehydrogenase Glutarates Guanosine Triphosphate Kinetics NAD NADP Spectrophotometry Ultracentrifugation
Chemicals
Glutarates NAD NADP Adenosine Diphosphate Guanosine Triphosphate Glutamate Dehydrogenase
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Dalziel K
Egan R R
References (25)
25 references, click to expand
  1. Glutamic dehydrogenase. III. The order of substrate addition in the enzymatic reaction.
    J Biol Chem. 1959 Nov;234:2891-6 PMID: 13825045
  2. The mechanism of glutamate dehydrogenase reaction. 3. The binding of ligands at multiple subsites and resulting kinetic effects.
    J Biol Chem. 1970 May 25;245(10):2612-21 PMID: 4392778
  3. Tyrosyl and lysyl residues involved in the reactivity of catalytic and regulatory sites of crystalline beef liver glutamate dehydrogenase.
    Biochemistry. 1971 Feb 16;10(4):585-9 PMID: 5101632
  4. The equilibrium constants of the glutamate dehydrogenase systems.
    Biochem J. 1967 Nov;105(2):691-5 PMID: 4384597
  5. Glutamic dehydrogenase. I. The effect of coenzyme on the sedimentation velocity and kinetic behavior.
    J Biol Chem. 1959 Apr;234(4):809-14 PMID: 13654268
  6. [Glutamate dehydrogenase. Attachment of NAD and NADP coenzymes and other nucleotides derived from adenosine-5'-phosphate].
    Eur J Biochem. 1969 Dec;11(3):510-9 PMID: 4391664
  7. ON THE NATURE OF ALLOSTERIC TRANSITIONS: A PLAUSIBLE MODEL.
    J Mol Biol. 1965 May;12:88-118 PMID: 14343300
  8. Kinetic studies of glutamate dehydrogenase with glutamate and norvaline as substrates. Coenzyme activation and negative homotropic interactions in allosteric enzymes.
    Biochem J. 1969 Dec;115(4):621-31 PMID: 4391040
  9. EQUILIBRIUM REACTION RATES AND THE MECHANISMS OF LIVER AND YEAST ALCOHOL DEHYDROGENASE.
    J Biol Chem. 1964 Nov;239:3908-14 PMID: 14257626
  10. [Regulation of the activity of glutamate dehydrogenase by effectors GTP and ADP: study by means of "stopped flow"].
    Bull Soc Chim Biol (Paris). 1967 Dec 18;49(11):1563-72 PMID: 5625636
  11. Active centre equivalent weight of glutamate dehydrogenase from dry weight determinations and spectrophotometric titrations of abortive complexes.
    Biochim Biophys Acta. 1971 Oct;250(1):47-50 PMID: 4400996
  12. The crystallization and characterization of L-glutamic acid dehydrogenase.
    J Biol Chem. 1952 May;197(1):67-79 PMID: 12981035
  13. Negative cooperativity in enzyme action. The binding of diphosphopyridine nucleotide to glyceraldehyde 3-phosphate dehydrogenase.
    Biochemistry. 1968 Nov;7(11):4011-23 PMID: 4301879
  14. Conformational changes and the regulation of glutamate-dehydrogenase activity.
    Biochem J. 1966 Jan;98(1):105-11 PMID: 4287181
  15. 1-Anilinonaphthalene-8-sulphonate, a fluorescent conformational probe for glutamate dehydrogenase.
    Biochem J. 1969 Sep;114(2):407-17 PMID: 4309311
  16. Bovine liver glutamate dehydrogenase: tentative amino acid sequence; identification of a reactive lysine; nitration of a specific tyrosine and loss of allosteric inhibition by guanosine triphosphate.
    Proc Natl Acad Sci U S A. 1970 Oct;67(2):724-30 PMID: 5289018
  17. Possible magnitude of inhibition of coenzyme-substrate reactions by competitive inhibitors in coenzyme preparations.
    Nature. 1962 Jul 28;195:384-5 PMID: 13883268
  18. GLUTAMATE DEHYDROGENASE. V. THE RELATION OF ENZYME STRUCTURE TO THE CATALYTIC FUNCTION.
    J Biol Chem. 1963 Oct;238:3286-99 PMID: 14085375
  19. Protein measurement with the Folin phenol reagent.
    J Biol Chem. 1951 Nov;193(1):265-75 PMID: 14907713
  20. Kinetic and equilibrium studies on crystalline 1-glutamic acid dehydrogenase.
    J Biol Chem. 1953 Jun;202(2):841-56 PMID: 13061508
  21. [Binding of ADP, NADH and NADPH on glutamatedehydrogenase, determined spectrophotometrically].
    Biochim Biophys Acta. 1967 Jan 11;132(1):217-20 PMID: 4382155
  22. L-glutamic acid dehydrogenase; structural requirements for substrate competition; effect of thyroxine.
    J Biol Chem. 1957 Jan;224(1):591-607 PMID: 13398432
  23. Sedimentation equilibrium studies on glutamic dehydrogenase.
    Biochemistry. 1971 Mar 16;10(6):1015-24 PMID: 5102487
  24. Antagonistic homotropic interactions as a possible explanation of coenzyme activation of glutamate dehydrogenase.
    FEBS Lett. 1968 Oct;1(5):349-352 PMID: 11945341
  25. Comparison of experimental binding data and theoretical models in proteins containing subunits.
    Biochemistry. 1966 Jan;5(1):365-85 PMID: 5938952
Article Info
Journal
The Biochemical journal
Abbr.
Biochem J
ISSN
0264-6021
Published
1972-02-00
Pages
975-84
Language
English
Region
England
NLM ID
2984726R
PMCID
PMC1178505
Subset
IM
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com