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PMID: 3865188 Published · ppublish English Journal Article Research Support, U.S. Gov't, P.H.S.

Variation among human 28S ribosomal RNA genes.

Gonzalez IL, Gorski JL, Campen TJ, Dorney DJ, Erickson JM, Sylvester JE, Schmickel RD

Abstract

We report the complete 5025-base sequence of the human 28S rRNA gene. Variability within the species has been demonstrated by sequencing a variable region from six separately cloned genes. This region is one of three large subunit rRNA regions that show extreme sequence and size variation among species. The interspecies differences suggest species-specific functions for these sections, while the intraspecies heterogeneity indicates differences among ribosomes. Comparison of the human gene with a partial sequence from the chimpanzee 28S gene yields divergence rates for the two species: 0.8% for conserved regions of the gene and 3.7% for a variable region. The rapid divergence rates of variable regions in the ribosomal gene may permit answers to the question of time of separation of closely related species.

MeSH Terms
Animals Base Sequence Biological Evolution Female Humans Pan troglodytes Pregnancy RNA, Ribosomal/analysis,genetics Species Specificity
Chemicals
RNA, Ribosomal
Authors & Affiliations
7 authors, click to expand affiliations / ORCID
Gonzalez I L
Gorski J L
Campen T J
Dorney D J
Erickson J M
Sylvester J E
Schmickel R D
References (26)
26 references, click to expand
  1. Evolution at two levels in humans and chimpanzees.
    Science. 1975 Apr 11;188(4184):107-16 PMID: 1090005
  2. Xenopus laevis 28S ribosomal RNA: a secondary structure model and its evolutionary and functional implications.
    Nucleic Acids Res. 1984 Aug 10;12(15):6197-220 PMID: 6147812
  3. Redundant genes.
    Annu Rev Genet. 1975;9:355-85 PMID: 1108767
  4. Processing of RNA.
    Annu Rev Biochem. 1976;45:605-29 PMID: 786158
  5. Biochemical evolution.
    Annu Rev Biochem. 1977;46:573-639 PMID: 409339
  6. DNA sequencing with chain-terminating inhibitors.
    Proc Natl Acad Sci U S A. 1977 Dec;74(12):5463-7 PMID: 271968
  7. An insert in the single gene for the large ribosomal RNA in yeast mitochondrial DNA.
    Nature. 1978 Sep 28;275(5678):336-8 PMID: 357991
  8. Expression of ribosomal DNA insertions in Drosophila melanogaster.
    Cell. 1979 Dec;18(4):1185-96 PMID: 117903
  9. Human fetal G gamma- and A gamma-globin genes: complete nucleotide sequences suggest that DNA can be exchanged between these duplicated genes.
    Cell. 1980 Oct;21(3):627-38 PMID: 7438203
  10. The structure and evolution of the human beta-globin gene family.
    Cell. 1980 Oct;21(3):653-68 PMID: 6985477
  11. Homology and concerted evolution at the alpha 1 and alpha 2 loci of human alpha-globin.
    Nature. 1981 Mar 5;290(5801):26-9 PMID: 7010180
  12. Primary and secondary structures of Escherichia coli MRE 600 23S ribosomal RNA. Comparison with models of secondary structure for maize chloroplast 23S rRNA and for large portions of mouse and human 16S mitochondrial rRNAs.
    Nucleic Acids Res. 1981 Sep 11;9(17):4303-24 PMID: 6170936
  13. Secondary structure model for 23S ribosomal RNA.
    Nucleic Acids Res. 1981 Nov 25;9(22):6167-89 PMID: 7031608
  14. The primary and secondary structure of yeast 26S rRNA.
    Nucleic Acids Res. 1981 Dec 21;9(24):6935-52 PMID: 7335496
  15. Structure and variation of human ribosomal DNA: molecular analysis of cloned fragments.
    Gene. 1981 Dec;16(1-3):1-9 PMID: 6282683
  16. Self-splicing RNA: autoexcision and autocyclization of the ribosomal RNA intervening sequence of Tetrahymena.
    Cell. 1982 Nov;31(1):147-57 PMID: 6297745
  17. Composite structure of the chloroplast 23 S ribosomal RNA genes of Chlamydomonas reinhardii. Evolutionary and functional implications.
    J Mol Biol. 1982 Aug 15;159(3):383-95 PMID: 6820067
  18. Complete nucleotide sequence of the 26S rRNA gene of Physarum polycephalum: its significance in gene evolution.
    Proc Natl Acad Sci U S A. 1983 Jun;80(11):3163-7 PMID: 6304693
  19. Exons--present from the beginning?
    Nature. 1983 Dec 8-14;306(5943):535-7 PMID: 6646232
  20. Sequence analysis of 28S ribosomal DNA from the amphibian Xenopus laevis.
    Nucleic Acids Res. 1983 Nov 25;11(22):7795-817 PMID: 6359063
  21. The structure of rat 28S ribosomal ribonucleic acid inferred from the sequence of nucleotides in a gene.
    Nucleic Acids Res. 1983 Nov 25;11(22):7819-31 PMID: 6316273
  22. Structural and evolutionary analysis of the two chimpanzee alpha-globin mRNAs.
    Nucleic Acids Res. 1983 Dec 20;11(24):8915-29 PMID: 6689503
  23. Paramecium mitochondrial genes. II. Large subunit rRNA gene sequence and microevolution.
    J Biol Chem. 1984 Apr 25;259(8):5173-81 PMID: 6715340
  24. The complete nucleotide sequence of mouse 28S rRNA gene. Implications for the process of size increase of the large subunit rRNA in higher eukaryotes.
    Nucleic Acids Res. 1984 Apr 25;12(8):3563-83 PMID: 6328426
  25. The phylogeny of the hominoid primates, as indicated by DNA-DNA hybridization.
    J Mol Evol. 1984;20(1):2-15 PMID: 6429338
  26. Regulation in rDNA-deficient Drosophila melanogaster.
    Cell. 1975 Mar;4(3):275-80 PMID: 804354
Article Info
Journal
Proceedings of the National Academy of Sciences of the United States of America
Abbr.
Proc Natl Acad Sci U S A
ISSN
0027-8424
Published
1985-11-00
Pages
7666-70
Language
English
Region
United States
NLM ID
7505876
PMCID
PMC391394
Subset
IM
Grants
NIGMS NIH HHS · GM 07511 · United States
NICHD NIH HHS · HD 16930 · United States
NICHD NIH HHS · K-11-HD 00610 · United States
Databases
GENBANK
K03429, K03433, K03434, M11167
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