Abstract
infC, the gene which codes for translation initiation factor 3, is situated in a cluster in the genome of Escherichia coli with genes for several other components of the translation apparatus. Only three nucleotides separate the termination codon of thrS from the initiation codon of infC. This implies that infC is either cotranscribed with thrS from a thrS promoter or that the transcriptional signals for infC are embedded within the upstream thrS coding region. In the present work, several plasmids have been constructed which encompass infC and various amounts of the upstream thrS sequence. The ability of the plasmid DNA, or derived restriction fragments, to direct the synthesis of initiation factor 3 was tested in an in vitro DNA-dependent coupled transcription-translation system and in plasmid-transformed maxicells. The results indicate that initiation factor 3 is synthesized in the absence of the thrS promoter. A promoter whose presence is sufficient for the expression of infC has been localized to an 89-base-pair region which lies 178 to 267 base pairs upstream of the infC initiation codon. S1 nuclease mapping of in vivo transcripts confirms that a transcription initiation site is located in this region. These studies demonstrate that infC can be transcribed from a promoter within the upstream thrS coding sequence.
MeSH Terms
Amino Acyl-tRNA Synthetases/genetics
Bacterial Proteins/biosynthesis,genetics
Cloning, Molecular
Escherichia coli/genetics,metabolism
Genes, Bacterial
Peptide Initiation Factors/biosynthesis,genetics
Prokaryotic Initiation Factor-3
Promoter Regions, Genetic
Protein Biosynthesis
Threonine-tRNA Ligase/genetics
Transcription, Genetic
Chemicals
Bacterial Proteins
Peptide Initiation Factors
Prokaryotic Initiation Factor-3
Amino Acyl-tRNA Synthetases
Threonine-tRNA Ligase
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Pramanik A
Wertheimer S J
Schwartz J J
Schwartz I
References (27)
27 references, click to expand
-
In vitro synthesis of bacteriophage lysozyme.
Nature. 1967 Aug 5;215(5101):588-91
PMID: 6050209
-
Autogenous control of Escherichia coli threonyl-tRNA synthetase expression in vivo.
J Mol Biol. 1985 Sep 5;185(1):93-104
PMID: 3930755
-
Chemical measurement of steady-state levels of ten aminoacyl-transfer ribonucleic acid synthetases in Escherichia coli.
J Bacteriol. 1977 Jan;129(1):378-87
PMID: 318645
-
DNA-directed in vitro synthesis of beta-galactosidase. Studies with purified factors.
J Biol Chem. 1977 Oct 10;252(19):6889-94
PMID: 561072
-
Simple method for identification of plasmid-coded proteins.
J Bacteriol. 1979 Jan;137(1):692-3
PMID: 368040
-
Determination of protein synthesis initiation factor levels in crude lysates of Escherichia coli by a sensitive radioimmune assay.
Arch Biochem Biophys. 1978 Dec;191(2):813-20
PMID: 105669
-
A rapid alkaline extraction procedure for screening recombinant plasmid DNA.
Nucleic Acids Res. 1979 Nov 24;7(6):1513-23
PMID: 388356
-
Photochemical cross-linking of initiation factor-3 to Escherichia coli 30 S ribosomal subunits.
J Biol Chem. 1980 Nov 10;255(21):10526-31
PMID: 7000779
-
Physical localisation and cloning of the structural gene for E. coli initiation factor IF3 from a group of genes concerned with translation.
Gene. 1980 Oct;11(1-2):33-42
PMID: 6254853
-
Gene organization around the phenylalanyl-transfer ribonucleic acid synthetase locus in Escherichia coli.
J Bacteriol. 1981 Apr;146(1):269-74
PMID: 7012115
-
Regulation of formation of threonyl-tRNA synthetase, phenylalanyl-tRNA synthetase and protein synthesis initiation factor 3 from Escherichia coli in vivo and in vitro.
Eur J Biochem. 1982 Apr;123(3):477-82
PMID: 7042343
-
Expression of the gene for Escherichia coli initiation factor IE-3 in vivo and in vitro.
Eur J Biochem. 1982 Apr;123(3):483-8
PMID: 7042344
-
Transcription units around the gene for E. coli translation initiation factor IF3 (infC).
Mol Gen Genet. 1982;186(2):247-52
PMID: 7050631
-
Initiation factors in protein biosynthesis.
Annu Rev Biochem. 1982;51:869-900
PMID: 7051967
-
Molecular cloning and regulation of expression of the genes for initiation factor 3 and two aminoacyl-tRNA synthetases.
J Bacteriol. 1982 Oct;152(1):357-62
PMID: 6749810
-
Initiation factor and ribosome levels are coordinately controlled in Escherichia coli growing at different rates.
J Biol Chem. 1983 Feb 10;258(3):1954-9
PMID: 6337147
-
Photochemical cross-linking of translation initiation factor 3 to Escherichia coli 50S ribosomal subunits.
Biochemistry. 1983 Mar 15;22(6):1483-9
PMID: 6340738
-
Molecular cloning and sequencing of pheU, a gene for Escherichia coli tRNAPhe.
Nucleic Acids Res. 1983 Jul 11;11(13):4379-89
PMID: 6306588
-
Structural and transcriptional evidence for related thrS and infC expression.
Proc Natl Acad Sci U S A. 1983 Oct;80(20):6152-6
PMID: 6353409
-
Escherichia coli phenylalanyl-tRNA synthetase operon region. Evidence for an attenuation mechanism. Identification of the gene for the ribosomal protein L20.
J Mol Biol. 1983 Dec 15;171(3):239-61
PMID: 6317865
-
Immunoprecipitation of proteins from cell-free translations.
Methods Enzymol. 1983;96:111-20
PMID: 6361451
-
Transcription of a gene cluster coding for two aminoacyl-tRNA synthetases and an initiation factor in Escherichia coli.
J Mol Biol. 1984 Feb 25;173(2):177-209
PMID: 6368838
-
Sequence of a 1.26-kb DNA fragment containing the structural gene for E.coli initiation factor IF3: presence of an AUU initiator codon.
EMBO J. 1982;1(3):311-5
PMID: 6325158
-
Autogenous repression of Escherichia coli threonyl-tRNA synthetase expression in vitro.
J Biol Chem. 1984 Apr 25;259(8):5232-7
PMID: 6325425
-
The gene encoding translation initiation factor 3 is highly conserved in gram-negative bacteria.
Arch Biochem Biophys. 1984 Nov 15;235(1):276-82
PMID: 6093710
-
Sequence of the Escherichia coli pheST operon and identification of the himA gene.
J Bacteriol. 1985 Aug;163(2):787-91
PMID: 2991205
-
A complementation analysis of the restriction and modification of DNA in Escherichia coli.
J Mol Biol. 1969 May 14;41(3):459-72
PMID: 4896022