Home LiteratureArticle Details
PMID: 3099166 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, P.H.S.

Identification of a nonhistone chromosomal protein associated with heterochromatin in Drosophila melanogaster and its gene.

Molecular and cellular biology ·Vol. 6 ·No. 11 ·1986-11-00 ·Pages 3862-72

James TC, Elgin SC

Abstract

Monoclonal antibodies were prepared against a fraction of nuclear proteins of Drosophila melanogaster identified as tightly binding to DNA. Four of these antibodies were directed against a 19-kilodalton nuclear protein; immunofluorescence staining of the polytene chromosomes localized the antigen to the alpha, beta, and intercalary heterochromatic regions. Screening of a lambda gt11 cDNA expression library with one of the monoclonal antibodies identified a recombinant DNA phage clone that produced a fusion protein immunologically similar to the heterochromatin-associated protein. Polyclonal sera directed against the bacterial lacZ fusion protein recognized the same nuclear protein on Western blots. A full-length cDNA clone was isolated from a lambda gt10 library, and its DNA sequence was obtained. Analysis of the open reading frame revealed an 18,101-dalton protein encoded by this cDNA. Two overlapping genomic DNA clones were isolated from a Charon 4 library of D. melanogaster with the cDNA clone, and a restriction map was obtained. In situ hybridization with these probes indicated that the gene maps to a single chromosome location at 29A on the 2L chromosome. This general strategy should be effective for cloning the genes and identifying the genetic loci of chromosomal proteins which cannot be readily assayed by other means.

MeSH Terms
Amino Acid Sequence Animals Antibodies Base Sequence Chromosomal Proteins, Non-Histone/analysis,genetics Chromosomes/ultrastructure DNA, Recombinant/metabolism Drosophila melanogaster/genetics Electrophoresis, Polyacrylamide Gel Fluorescent Antibody Technique Genes Heterochromatin/ultrastructure
Chemicals
Antibodies Chromosomal Proteins, Non-Histone DNA, Recombinant Heterochromatin
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
James T C
Elgin S C
References (55)
55 references, click to expand
  1. Histone variants specific to the transcriptionally active, amitotically dividing macronucleus of the unicellular eucaryote, Tetrahymena thermophila.
    Cell. 1980 Jul;20(3):609-17 PMID: 7418000
  2. The phenomenon of position effect.
    Adv Genet. 1950;3:73-115 PMID: 15425389
  3. Monoclonal antibodies against a specific nonhistone chromosomal protein of Drosophila associated with active genes.
    J Cell Biol. 1981 Jan;88(1):219-25 PMID: 6782108
  4. Molecular arrangement and evolution of heterochromatic DNA.
    Annu Rev Genet. 1980;14:121-44 PMID: 6260016
  5. Transcription of heat shock loci of Drosophila in a nuclear system.
    Biochemistry. 1981 Aug 18;20(17):5033-42 PMID: 6794604
  6. Preparation of monoclonal antibodies: strategies and procedures.
    Methods Enzymol. 1981;73(Pt B):3-46 PMID: 7300683
  7. The preparation and characterization of locust vitellogenin messenger RNA and the synthesis of its complementary DNA.
    Biochem J. 1981 Jan 1;193(1):209-16 PMID: 7305922
  8. A set of synthetic oligodeoxyribonucleotide primers for DNA sequencing in the plasmid vector pBR322.
    Gene. 1981 Dec;16(1-3):21-6 PMID: 6282692
  9. On the relationship between heterochromatization and variegation in Drosophila, with special reference to temperature-sensitive periods.
    Genet Res. 1967 Oct;10(2):143-59 PMID: 6064103
  10. High resolution acrylamide gel electrophoresis of histones.
    Arch Biochem Biophys. 1969 Mar;130(1):337-46 PMID: 5778650
  11. Cleavage of structural proteins during the assembly of the head of bacteriophage T4.
    Nature. 1970 Aug 15;227(5259):680-5 PMID: 5432063
  12. Lac repressor can be fused to beta-galactosidase.
    Nature. 1974 Jun 7;249(457):561-3 PMID: 4599764
  13. EM autoradiographic studies on polytene nuclei of Drosophila melanogaster. II. Organization and transcriptive activity of the chromocentre.
    Exp Cell Res. 1974 Jun;86(2):253-63 PMID: 4210378
  14. Detection of specific sequences among DNA fragments separated by gel electrophoresis.
    J Mol Biol. 1975 Nov 5;98(3):503-17 PMID: 1195397
  15. A method for determination of the in situ distribution of chromosomal proteins.
    Proc Natl Acad Sci U S A. 1976 Feb;73(2):423-7 PMID: 813226
  16. Conformational studies of two non-histone chromosomal proteins and their interactions with DNA.
    Eur J Biochem. 1976 Mar 1;62(3):583-90 PMID: 4304
  17. Physical studies of the nonhistone chromosomal proteins HMG-U and HMG-2.
    Biochemistry. 1976 Apr 20;15(8):1645-9 PMID: 5107
  18. Screening lambdagt recombinant clones by hybridization to single plaques in situ.
    Science. 1977 Apr 8;196(4286):180-2 PMID: 322279
  19. Labeling deoxyribonucleic acid to high specific activity in vitro by nick translation with DNA polymerase I.
    J Mol Biol. 1977 Jun 15;113(1):237-51 PMID: 881736
  20. Distribution patterns of three subfractions of drosophila nonhistone chromosomal proteins: possible correlations with gene activity.
    Cell. 1977 Aug;11(4):971-83 PMID: 408016
  21. RNA molecular weight determinations by gel electrophoresis under denaturing conditions, a critical reexamination.
    Biochemistry. 1977 Oct 18;16(21):4743-51 PMID: 911786
  22. DNA sequencing with chain-terminating inhibitors.
    Proc Natl Acad Sci U S A. 1977 Dec;74(12):5463-7 PMID: 271968
  23. RNA polymerase B (or II) in heat induced puffs of Drosophila polytene chromosomes.
    Chromosoma. 1978 Jan 16;65(2):127-36 PMID: 414900
  24. The use of thin acrylamide gels for DNA sequencing.
    FEBS Lett. 1978 Mar 1;87(1):107-10 PMID: 631324
  25. The isolation of structural genes from libraries of eucaryotic DNA.
    Cell. 1978 Oct;15(2):687-701 PMID: 719759
  26. A protein that preferentially binds Drosophila satellite DNA.
    Proc Natl Acad Sci U S A. 1979 Feb;76(2):726-30 PMID: 106393
  27. The chromatin structure of specific genes: I. Evidence for higher order domains of defined DNA sequence.
    Cell. 1979 Apr;16(4):797-806 PMID: 455449
  28. Efficient transfer of large DNA fragments from agarose gels to diazobenzyloxymethyl-paper and rapid hybridization by using dextran sulfate.
    Proc Natl Acad Sci U S A. 1979 Aug;76(8):3683-7 PMID: 291033
  29. Electrophoretic transfer of proteins from polyacrylamide gels to nitrocellulose sheets: procedure and some applications.
    Proc Natl Acad Sci U S A. 1979 Sep;76(9):4350-4 PMID: 388439
  30. Immunological identification of a chromocenter-associated protein in polytene chromosomes of Drosophila.
    Exp Cell Res. 1980 Feb;125(2):401-10 PMID: 6766400
  31. Sequencing end-labeled DNA with base-specific chemical cleavages.
    Methods Enzymol. 1980;65(1):499-560 PMID: 6246368
  32. Isolation, properties and cellular distribution of D1, a chromosomal protein of Drosophila.
    Chromosoma. 1980;78(1):1-31 PMID: 6769651
  33. Genetic transformation of Drosophila with transposable element vectors.
    Science. 1982 Oct 22;218(4570):348-53 PMID: 6289436
  34. Chromatin structure and gene activity: the role of nonhistone chromosomal proteins.
    CRC Crit Rev Biochem. 1982;13(1):1-86 PMID: 6751690
  35. Mutants affecting position-effect heterochromatinization in Drosophila melanogaster.
    Chromosoma. 1982;85(4):539-51 PMID: 6813058
  36. Protein D1 preferentially binds A + T-rich DNA in vitro and is a component of Drosophila melanogaster nucleosomes containing A + T-rich satellite DNA.
    Proc Natl Acad Sci U S A. 1982 Dec;79(23):7152-6 PMID: 6818540
  37. Efficient isolation of genes by using antibody probes.
    Proc Natl Acad Sci U S A. 1983 Mar;80(5):1194-8 PMID: 6219389
  38. Isolation and characterization of monoclonal antibodies against rat liver epoxide hydrolase.
    Arch Biochem Biophys. 1983 Feb 15;221(1):79-88 PMID: 6402988
  39. Monoclonal antibodies against HLA products and their use in immunoaffinity purification.
    Methods Enzymol. 1983;92:110-38 PMID: 6343761
  40. Methods of enhancing the frequency of antigen-specific hybridomas.
    Methods Enzymol. 1983;92:17-26 PMID: 6855610
  41. Comparison of initiation of protein synthesis in procaryotes, eucaryotes, and organelles.
    Microbiol Rev. 1983 Mar;47(1):1-45 PMID: 6343825
  42. Identification of a structural gene for a RNA polymerase II polypeptide in Drosophila melanogaster and mammalian species.
    Proc Natl Acad Sci U S A. 1983 Jun;80(11):3396-400 PMID: 6407013
  43. A rapid alkaline extraction method for the isolation of plasmid DNA.
    Methods Enzymol. 1983;100:243-55 PMID: 6353143
  44. Synthesis of ds-cDNA involving addition of dCMP tails to allow cloning of 5'-terminal m RNA sequences.
    Methods Enzymol. 1983;100:285-92 PMID: 6194405
  45. Human anticentromere antibodies: distribution, characterization of antigens, and effect on microtubule organization.
    Cell. 1983 Nov;35(1):331-9 PMID: 6605200
  46. Yeast DNA topoisomerase II is encoded by a single-copy, essential gene.
    Cell. 1984 Apr;36(4):1073-80 PMID: 6323017
  47. Genomic sequencing.
    Proc Natl Acad Sci U S A. 1984 Apr;81(7):1991-5 PMID: 6326095
  48. The engrailed locus of Drosophila: structural analysis of an embryonic transcript.
    Cell. 1985 Jan;40(1):37-43 PMID: 3917855
  49. Ubiquitin is a heat shock protein in chicken embryo fibroblasts.
    Mol Cell Biol. 1985 May;5(5):949-56 PMID: 2987683
  50. Genes for the major protein antigens of the leprosy parasite Mycobacterium leprae.
    Nature. 1985 Aug 1-7;316(6027):450-2 PMID: 3894979
  51. Dideoxy sequencing method using denatured plasmid templates.
    Anal Biochem. 1986 Feb 1;152(2):232-8 PMID: 3516005
  52. Multiple upstream AUG codons mediate translational control of GCN4.
    Cell. 1986 Apr 25;45(2):201-7 PMID: 3516411
  53. Compilation analysis of histones and histone genes.
    Nucleic Acids Res. 1986;14 Suppl:r119-49 PMID: 3703683
  54. Mammalian X-chromosome action: inactivation limited in spread and region of origin.
    Science. 1963 May 31;140(3570):976-8 PMID: 13975649
  55. Monoclonal antibodies against chromosomal proteins of Drosophila melanogaster: establishment of antibody producing cell lines and partial characterization of corresponding antigens.
    Chromosoma. 1980;80(3):253-75 PMID: 6777121
Article Info
Journal
Molecular and cellular biology
Abbr.
Mol Cell Biol
ISSN
0270-7306
Published
1986-11-00
Pages
3862-72
Language
English
Region
United States
NLM ID
8109087
PMCID
PMC367149
Subset
IM
Grants
NIGMS NIH HHS · GM31532 · United States
Databases
GENBANK
M14131
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com