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PMID: 3059350 Published · ppublish English Journal Article

Interaction of spatially separated protein-DNA complexes for control of gene expression: operator conversions.

Haber R, Adhya S

Abstract

Two operators, spatially separated from each other and from the promoters, repress the gal operon when bound to Gal repressor. Conversion of either gal operator to a lac operator results in derepression, although both Gal and Lac repressors are present, suggesting that mere occupation of operator sites is not sufficient to cause repression. Conversion of both operators to lac operators restores normal repression in the presence of Lac repressor protein. We propose that normal repression requires interaction between operator-bound like repressor molecules; this generates a DNA loop, which is part of a higher order structure. RNA polymerase and cyclic AMP receptor protein are present in this complex but unable to initiate transcription because of the higher order structure. Such higher order DNA-multiprotein complexes could occur in a variety of genetic regulatory systems that are controlled from distal sites by regulatory proteins.

MeSH Terms
Base Sequence DNA-Directed RNA Polymerases/analysis Escherichia coli/genetics Escherichia coli Proteins Gene Expression Regulation Genes Genes, Bacterial Macromolecular Substances Multiprotein Complexes Nucleic Acid Conformation Operator Regions, Genetic Operon Plasmids Receptors, Cyclic AMP/analysis Repressor Proteins/metabolism
Chemicals
Escherichia coli Proteins Galactose repressor proteins Macromolecular Substances Multiprotein Complexes Receptors, Cyclic AMP Repressor Proteins DNA-Directed RNA Polymerases
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Haber R
Laboratory of Molecular Biology, National Cancer Institute, Bethesda, MD 20892.
Adhya S
References (38)
38 references, click to expand
  1. Positive control of enzyme synthesis by gene C in the L-arabinose system.
    J Bacteriol. 1965 Oct;90(4):946-57 PMID: 5321403
  2. COMPLEMENTATION STUDIES OF ARABINOSE GENES IN ESCHERICHIA COLI.
    Genetics. 1963 Oct;48:1397-410 PMID: 14071758
  3. Mutants that make more lac repressor.
    Proc Natl Acad Sci U S A. 1968 Apr;59(4):1259-64 PMID: 4870861
  4. Negative control of the galactose operon in E. coli.
    Mol Gen Genet. 1968;102(1):79-88 PMID: 4883532
  5. In vitro repression of the transcription of gas operon by purified gal repressor.
    Proc Natl Acad Sci U S A. 1973 Feb;70(2):334-8 PMID: 4346883
  6. Dual control for transcription of the galactose operon by cyclic AMP and its receptor protein at two interspersed promoters.
    Cell. 1977 Nov;12(3):847-54 PMID: 200371
  7. DNA sequencing with chain-terminating inhibitors.
    Proc Natl Acad Sci U S A. 1977 Dec;74(12):5463-7 PMID: 271968
  8. Modulation of the two promoters of the galactose operon of Escherichia coli.
    Nature. 1979 Jun 7;279(5713):492-4 PMID: 221830
  9. Use of bio-lac fusion strains to study regulation of biotin biosynthesis in Escherichia coli.
    J Bacteriol. 1980 Aug;143(2):789-800 PMID: 6782078
  10. Expression of a beta-globin gene is enhanced by remote SV40 DNA sequences.
    Cell. 1981 Dec;27(2 Pt 1):299-308 PMID: 6277502
  11. The SV40 72 bp repeat preferentially potentiates transcription starting from proximal natural or substitute promoter elements.
    Cell. 1983 Feb;32(2):503-14 PMID: 6297796
  12. A control element within a structural gene: the gal operon of Escherichia coli.
    Cell. 1983 Mar;32(3):783-8 PMID: 6299576
  13. Enhancer elements.
    Cell. 1983 Jun;33(2):313-4 PMID: 6305503
  14. Immunoglobulin gene transcription is activated by downstream sequence elements.
    Cell. 1983 Jul;33(3):741-8 PMID: 6409419
  15. Cyclic AMP-dependent constitutive expression of gal operon: use of repressor titration to isolate operator mutations.
    Proc Natl Acad Sci U S A. 1983 Aug;80(15):4775-9 PMID: 6308647
  16. Possible ideal lac operator: Escherichia coli lac operator-like sequences from eukaryotic genomes lack the central G X C pair.
    Proc Natl Acad Sci U S A. 1984 Mar;81(6):1624-8 PMID: 6369330
  17. An operator at -280 base pairs that is required for repression of araBAD operon promoter: addition of DNA helical turns between the operator and promoter cyclically hinders repression.
    Proc Natl Acad Sci U S A. 1984 Aug;81(16):5017-20 PMID: 6089170
  18. Demonstration of two operator elements in gal: in vitro repressor binding studies.
    Proc Natl Acad Sci U S A. 1984 Oct;81(19):6100-4 PMID: 6385008
  19. Identification of sites required for repression of a silent mating type locus in yeast.
    J Mol Biol. 1984 Oct 5;178(4):815-34 PMID: 6092645
  20. Rapid and efficient site-specific mutagenesis without phenotypic selection.
    Proc Natl Acad Sci U S A. 1985 Jan;82(2):488-92 PMID: 3881765
  21. Role of DNA regions flanking the tryptophan promoter of Escherichia coli. II. Insertion of lac operator fragments.
    Gene. 1984 Dec;32(3):349-56 PMID: 6397404
  22. Improved oligonucleotide site-directed mutagenesis using M13 vectors.
    Nucleic Acids Res. 1985 Jun 25;13(12):4431-43 PMID: 2989795
  23. Cooperative binding of lambda repressors to sites separated by integral turns of the DNA helix.
    Cell. 1986 Mar 14;44(5):681-7 PMID: 3948245
  24. Two operator sites separated by 599 base pairs are required for deoR repression of the deo operon of Escherichia coli.
    EMBO J. 1985 Dec 1;4(12):3333-8 PMID: 3004952
  25. Transcriptional "silencer" element in rat repetitive sequences associated with the rat insulin 1 gene locus.
    Proc Natl Acad Sci U S A. 1986 May;83(10):3151-5 PMID: 3010279
  26. Transcription of glnA in E. coli is stimulated by activator bound to sites far from the promoter.
    Cell. 1986 Jun 20;45(6):785-92 PMID: 2871943
  27. lac Repressor blocks transcribing RNA polymerase and terminates transcription.
    Proc Natl Acad Sci U S A. 1986 Jun;83(12):4134-7 PMID: 3520567
  28. Upstream operators enhance repression of the lac promoter.
    Science. 1986 Aug 22;233(4766):889-92 PMID: 3090685
  29. Purification and properties of Gal repressor:pL-galR fusion in pKC31 plasmid vector.
    J Biol Chem. 1987 Feb 15;262(5):2326-31 PMID: 2950087
  30. lac repressor blocks in vivo transcription of lac control region DNA.
    Proc Natl Acad Sci U S A. 1987 May;84(10):3199-203 PMID: 3554233
  31. Regulation of inducible and tissue-specific gene expression.
    Science. 1987 Jun 5;236(4806):1237-45 PMID: 3296191
  32. lac repressor forms loops with linear DNA carrying two suitably spaced lac operators.
    EMBO J. 1987 May;6(5):1481-91 PMID: 3301328
  33. Identification of a cell-specific transcriptional enhancer in the first intron of the mouse alpha 2 (type I) collagen gene.
    Proc Natl Acad Sci U S A. 1987 Aug;84(16):5590-4 PMID: 3039494
  34. Homeo domain of the yeast repressor alpha 2 is a sequence-specific DNA-binding domain but is not sufficient for repression.
    Science. 1987 Aug 28;237(4818):1007-12 PMID: 2887035
  35. Probing the structure of gal operator-repressor complexes. Conformation change in DNA.
    J Biol Chem. 1987 Sep 25;262(27):13258-62 PMID: 3308875
  36. Galactose-sensitive mutants of Salmonella. I. Metabolism of galactose.
    Biochim Biophys Acta. 1961 Apr 15;48:460-9 PMID: 13729042
  37. [REGULATORY MECHANISMS IN THE BIOSYNTHESIS OF THE ENZYMES OF GALACTOSE METABOLISM IN ESCHERICHIA COLI K 12. II. THE GENETIC DETERMINISM OF THE REGULATION].
    J Mol Biol. 1963 Aug;7:183-205 PMID: 14062651
  38. Glucose effect and the galactose enzymes of Escherichia coli: correlation between glucose inhibition of induction and inducer transport.
    J Bacteriol. 1966 Sep;92(3):601-8 PMID: 5332079
Article Info
Journal
Proceedings of the National Academy of Sciences of the United States of America
Abbr.
Proc Natl Acad Sci U S A
ISSN
0027-8424
Published
1988-12-00
Pages
9683-7
Language
English
Region
United States
NLM ID
7505876
PMCID
PMC282836
Subset
IM
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