Abstract
Long noncoding RNAs (lncRNAs) have emerged as important regulators in a variety of human diseases, including cancers. However, the biological function of these molecules and the mechanisms responsible for their alteration in gastric cancer (GC) are not fully understood. In this study, we found that lncRNA LINC00673 is significantly upregulated in gastric cancer. Knockdown of LINC00673 inhibited cell proliferation and invasion and induced cell apoptosis, whereas LINC00673 overexpression had the opposite effect. Online transcription factor binding site prediction analysis showed that there are SP1 binding sites in the LINC00673 promoter region. Next, luciferase reporter and chromatin immunoprecipitation (ChIP) assays provided evidence that SP1 could bind directly to the LINC00673 promoter region and activate its transcription. Moreover, mechanistic investigation showed that CADM4, KLF2, and LATS2 might be the underlying targets of LINC00673 in GC cells, and RNA immunoprecipitation, RNA pull-down, and ChIP assays showed that LINC00673 can interact with EZH2 and LSD1, thereby repressing KLF2 and LATS2 expression. Taken together, these findings show that SP1-activated LINC00673 exerts an oncogenic function that promotes GC development and progression, at least in part, by functioning as a scaffold for LSD1 and EZH2 and repressing KLF2 and LATS2 expression.
Keywords
LINC00673
cell growth
gastric cancer
lncRNA
metastasis
MeSH Terms
Apoptosis/genetics
Binding Sites
Cell Line, Tumor
Cell Movement
Cell Proliferation/genetics
Enhancer of Zeste Homolog 2 Protein/genetics
Epistasis, Genetic
Gene Expression Regulation, Neoplastic
Gene Knockdown Techniques
Histone Demethylases/genetics
Humans
Models, Biological
Neoplasm Metastasis
Oncogenes
Prognosis
Protein Binding
RNA, Long Noncoding/genetics
Sp1 Transcription Factor/metabolism
Stomach Neoplasms/genetics,metabolism,mortality,pathology
Transcriptional Activation
Chemicals
RNA, Long Noncoding
Sp1 Transcription Factor
Histone Demethylases
KDM1A protein, human
EZH2 protein, human
Enhancer of Zeste Homolog 2 Protein
Authors & Affiliations
8 authors, click to expand affiliations / ORCID
Huang Mingde
Department of Medical Oncology, Huai'an First People's Hospital, Nanjing Medical University, Huai'an 223300, People's Republic of China; Department of Bioinformatics and Computational Biology, University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.
Hou Jiakai
Department of Bioinformatics and Computational Biology, University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.
Wang Yunfei
Department of Bioinformatics and Computational Biology, University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.
Xie Min
Department of Biochemistry and Molecular Biology, Nanjing Medical University, Nanjing 210011, People's Republic of China.
Wei Chenchen
Department of Oncology, Second Affiliated Hospital, Nanjing Medical University, Nanjing 210011, People's Republic of China.
Nie Fengqi
Department of Oncology, Second Affiliated Hospital, Nanjing Medical University, Nanjing 210011, People's Republic of China. Electronic address: 957714486@qq.com.
Wang Zhaoxia
Department of Oncology, Second Affiliated Hospital, Nanjing Medical University, Nanjing 210011, People's Republic of China. Electronic address: zhaoxiawang88@hotmail.com.
Sun Ming
Department of Bioinformatics and Computational Biology, University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA. Electronic address: msun7@mdanderson.org.
References (36)
36 references, click to expand
-
Long noncoding RNA ANRIL indicates a poor prognosis of gastric cancer and promotes tumor growth by epigenetically silencing of miR-99a/miR-449a.
Oncotarget. 2014 Apr 30;5(8):2276-92
PMID: 24810364
-
Upregulation of long intergenic noncoding RNA 00673 promotes tumor proliferation via LSD1 interaction and repression of NCALD in non-small-cell lung cancer.
Oncotarget. 2016 May 3;7(18):25558-75
PMID: 27027352
-
Comprehensive Genomic Characterization of Long Non-coding RNAs across Human Cancers.
Cancer Cell. 2015 Oct 12;28(4):529-40
PMID: 26461095
-
Long non-coding RNAs: a new frontier in the study of human diseases.
Cancer Lett. 2013 Oct 10;339(2):159-66
PMID: 23791884
-
Long noncoding RNA ZFAS1 promotes gastric cancer cells proliferation by epigenetically repressing KLF2 and NKD2 expression.
Oncotarget. 2016 May 26;:null
PMID: 27246976
-
Long noncoding RNAs in development and cancer: potential biomarkers and therapeutic targets.
Mol Cell Ther. 2015 Jun 12;3:5
PMID: 26082843
-
Down-regulation of LATS kinases alters p53 to promote cell migration.
Genes Dev. 2015 Nov 15;29(22):2325-30
PMID: 26588988
-
No-nonsense functions for long noncoding RNAs.
Cell. 2011 Apr 15;145(2):178-81
PMID: 21496640
-
Pancreatic cancer risk variant in LINC00673 creates a miR-1231 binding site and interferes with PTPN11 degradation.
Nat Genet. 2016 Jul;48(7):747-57
PMID: 27213290
-
LATS2 is a tumor suppressor gene of malignant mesothelioma.
Cancer Res. 2011 Feb 1;71(3):873-83
PMID: 21245096
-
Krüppel-like transcription factors: a functional family.
Int J Biochem Cell Biol. 2008;40(10):1996-2001
PMID: 17904406
-
Down-regulation of LATS1 and LATS2 mRNA expression by promoter hypermethylation and its association with biologically aggressive phenotype in human breast cancers.
Clin Cancer Res. 2005 Feb 15;11(4):1380-5
PMID: 15746036
-
Comprehensive genomic meta-analysis identifies intra-tumoural stroma as a predictor of survival in patients with gastric cancer.
Gut. 2013 Aug;62(8):1100-11
PMID: 22735568
-
Kruppel-like factor 2 suppresses mammary carcinoma growth by regulating retinoic acid signaling.
Oncotarget. 2015 Nov 3;6(34):35830-42
PMID: 26416422
-
Long noncoding RNAs: a potential novel class of cancer biomarkers.
Front Genet. 2015 Apr 23;6:145
PMID: 25954300
-
Landscape of transcription in human cells.
Nature. 2012 Sep 6;489(7414):101-8
PMID: 22955620
-
Cancer statistics in China, 2015.
CA Cancer J Clin. 2016 Mar-Apr;66(2):115-32
PMID: 26808342
-
GENCODE: the reference human genome annotation for The ENCODE Project.
Genome Res. 2012 Sep;22(9):1760-74
PMID: 22955987
-
Characterization of differentially expressed genes involved in pathways associated with gastric cancer.
PLoS One. 2015 Apr 30;10(4):e0125013
PMID: 25928635
-
Expression and Function of Kruppel Like-Factors (KLF) in Carcinogenesis.
Curr Genomics. 2009 Aug;10(5):353-60
PMID: 20119532
-
Common variation at 2p13.3, 3q29, 7p13 and 17q25.1 associated with susceptibility to pancreatic cancer.
Nat Genet. 2015 Aug;47(8):911-6
PMID: 26098869
-
Cancer statistics, 2013.
CA Cancer J Clin. 2013 Jan;63(1):11-30
PMID: 23335087
-
Sp1- and Krüppel-like transcription factors.
Genome Biol. 2003;4(2):206
PMID: 12620113
-
Molecular pathology of gastric carcinoma.
Pathobiology. 2011;78(6):302-10
PMID: 22104201
-
Decreased expression of long noncoding RNA GAS5 indicates a poor prognosis and promotes cell proliferation in gastric cancer.
BMC Cancer. 2014 May 06;14:319
PMID: 24884417
-
Long noncoding RNA HOXA-AS2 promotes gastric cancer proliferation by epigenetically silencing P21/PLK3/DDIT3 expression.
Oncotarget. 2015 Oct 20;6(32):33587-601
PMID: 26384350
-
LATS tumor suppressor: a new governor of cellular homeostasis.
Cell Cycle. 2010 Oct 1;9(19):3892-903
PMID: 20935475
-
Lnc RNA HOTAIR functions as a competing endogenous RNA to regulate HER2 expression by sponging miR-331-3p in gastric cancer.
Mol Cancer. 2014 Apr 28;13:92
PMID: 24775712
-
Downregulated long noncoding RNA MEG3 is associated with poor prognosis and promotes cell proliferation in gastric cancer.
Tumour Biol. 2014 Feb;35(2):1065-73
PMID: 24006224
-
LincHOTAIR epigenetically silences miR34a by binding to PRC2 to promote the epithelial-to-mesenchymal transition in human gastric cancer.
Cell Death Dis. 2015 Jul 02;6:e1802
PMID: 26136075
-
EZH2-mediated epigenetic suppression of long noncoding RNA SPRY4-IT1 promotes NSCLC cell proliferation and metastasis by affecting the epithelial-mesenchymal transition.
Cell Death Dis. 2014 Jun 26;5:e1298
PMID: 24967960
-
Cancer statistics, 2014.
CA Cancer J Clin. 2014 Jan-Feb;64(1):9-29
PMID: 24399786
-
Global cancer statistics.
CA Cancer J Clin. 2011 Mar-Apr;61(2):69-90
PMID: 21296855
-
Long noncoding RNAs in cancer: from function to translation.
Trends Cancer. 2015 Oct 1;1(2):93-109
PMID: 26693181
-
Long noncoding RNAs and human disease.
Trends Cell Biol. 2011 Jun;21(6):354-61
PMID: 21550244
-
Long non-coding RNA MEG3 inhibits NSCLC cells proliferation and induces apoptosis by affecting p53 expression.
BMC Cancer. 2013 Oct 07;13:461
PMID: 24098911