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PMID: 27214796 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Manipulation of flowering time and branching by overexpression of the tomato transcription factor SlZFP2.

Plant biotechnology journal ·Vol. 14 ·No. 12 ·2016-00-00 ·Pages 2310-2321

Weng L, Bai X, Zhao F, Li R, Xiao H

Abstract

Flowering of higher plants is orchestrated by complex regulatory networks through integration of various environmental signals such as photoperiod, temperature, light quality and developmental cues. In Arabidopsis, transcription of the flowering integrator gene FLOWERING LOCUS T (FT) that several flowering pathways converge to is directly regulated by more than ten transcription factors. However, very little is known about the transcriptional regulation of the FT homolog SINGLE FLOWER TRUESS (SFT) in the day-neutral plant tomato (Solanum lycopersicum). Previously, we showed that the zinc finger transcription factor SlZFP2 plays important roles in regulation of seed germination and fruit ripening in tomato and also found that overexpression of SlZFP2 impacted flowering and branching. Here, we characterized in detail the early flowering and high branching phenotypes by overexpression of this transcription factor. Our data showed that overexpression of SlZFP2 accelerated flowering in an SFT-dependent manner as demonstrated by elevated SFT expression in the leaves and the transcription factor's binding ability to SFT promoter in vitro and in vivo. Furthermore, overexpression of the SlZFP2 gene in the sft plants failed to rescue the mutant's late flowering. Through analysis of grafting phenotype, growth response of branches to auxin application and transcriptome profiling by RNA sequencing, we also showed that overexpression of SlZFP2 affected shoot apical dominance through multiple regulatory pathways. Our results suggest that the transcription factor SlZFP2 has potential applications in genetic modification of plant architecture and flowering time for tomato production and other crops as well.

Keywords
RNA sequencing branching flowering time overexpression tomato (Solanum lycopersicum) transcriptional regulation
MeSH Terms
Flowers/genetics,metabolism Gene Expression Lycopersicon esculentum/genetics,metabolism Plant Proteins/genetics,metabolism RNA, Plant/genetics Transcription Factors/genetics,metabolism
Chemicals
Plant Proteins RNA, Plant Transcription Factors
Authors & Affiliations
5 authors, click to expand affiliations / ORCID
Weng Lin
National Key Laboratory of Plant Molecular Genetics, CAS Center for Excellence in Molecular Plant Sciences, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai, China.
Bai Xiaodong
Center for RNA Molecular Biology, Case Western Reserve University, School of Medicine, Cleveland, OH, USA.
Zhao Fangfang
National Key Laboratory of Plant Molecular Genetics, CAS Center for Excellence in Molecular Plant Sciences, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai, China.
Li Rong
National Key Laboratory of Plant Molecular Genetics, CAS Center for Excellence in Molecular Plant Sciences, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai, China.
Xiao Han ORCID
National Key Laboratory of Plant Molecular Genetics, CAS Center for Excellence in Molecular Plant Sciences, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai, China.
References (57)
57 references, click to expand
  1. Flowering time regulation produces much fruit.
    Curr Opin Plant Biol. 2009 Feb;12(1):75-80 PMID: 18938104
  2. The flowering time regulator CONSTANS is recruited to the FLOWERING LOCUS T promoter via a unique cis-element.
    New Phytol. 2010 Jul;187(1):57-66 PMID: 20406410
  3. Arabidopsis TOE proteins convey a photoperiodic signal to antagonize CONSTANS and regulate flowering time.
    Genes Dev. 2015 May 1;29(9):975-87 PMID: 25934507
  4. Integration of tomato reproductive developmental landmarks and expression profiles, and the effect of SUN on fruit shape.
    BMC Plant Biol. 2009 May 07;9:49 PMID: 19422692
  5. WRKY71 accelerates flowering via the direct activation of FLOWERING LOCUS T and LEAFY in Arabidopsis thaliana.
    Plant J. 2016 Jan;85(1):96-106 PMID: 26643131
  6. The inhibitory effect of ABA on floral transition is mediated by ABI5 in Arabidopsis.
    J Exp Bot. 2013 Jan;64(2):675-84 PMID: 23307919
  7. The tomato Blind gene encodes a MYB transcription factor that controls the formation of lateral meristems.
    Proc Natl Acad Sci U S A. 2002 Jan 22;99(2):1064-9 PMID: 11805344
  8. The flowering gene SINGLE FLOWER TRUSS drives heterosis for yield in tomato.
    Nat Genet. 2010 May;42(5):459-63 PMID: 20348958
  9. Maternal temperature history activates Flowering Locus T in fruits to control progeny dormancy according to time of year.
    Proc Natl Acad Sci U S A. 2014 Dec 30;111(52):18787-92 PMID: 25516986
  10. The plant stress hormone ethylene controls floral transition via DELLA-dependent regulation of floral meristem-identity genes.
    Proc Natl Acad Sci U S A. 2007 Apr 10;104(15):6484-9 PMID: 17389366
  11. Mapping and quantifying mammalian transcriptomes by RNA-Seq.
    Nat Methods. 2008 Jul;5(7):621-8 PMID: 18516045
  12. FLOWERING LOCUS T genes control onion bulb formation and flowering.
    Nat Commun. 2013;4:2884 PMID: 24300952
  13. The zinc finger transcription factor SlZFP2 negatively regulates abscisic acid biosynthesis and fruit ripening in tomato.
    Plant Physiol. 2015 Mar;167(3):931-49 PMID: 25637453
  14. The Lateral suppressor (Ls) gene of tomato encodes a new member of the VHIID protein family.
    Proc Natl Acad Sci U S A. 1999 Jan 5;96(1):290-5 PMID: 9874811
  15. Florigen and anti-florigen - a systemic mechanism for coordinating growth and termination in flowering plants.
    Front Plant Sci. 2014 Sep 16;5:465 PMID: 25278944
  16. TopHat: discovering splice junctions with RNA-Seq.
    Bioinformatics. 2009 May 1;25(9):1105-11 PMID: 19289445
  17. SCFTIR1/AFB-based auxin perception: mechanism and role in plant growth and development.
    Plant Cell. 2015 Jan;27(1):9-19 PMID: 25604443
  18. Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation.
    Nat Biotechnol. 2010 May;28(5):511-5 PMID: 20436464
  19. The fall and rise of apical dominance.
    Curr Opin Genet Dev. 2005 Aug;15(4):468-71 PMID: 15964756
  20. Characterization of tomato (Solanum lycopersicum L.) mutants affected in their flowering time and in the morphogenesis of their reproductive structure.
    J Exp Bot. 2006;57(6):1381-90 PMID: 16547125
  21. Optimization of crop productivity in tomato using induced mutations in the florigen pathway.
    Nat Genet. 2014 Dec;46(12):1337-42 PMID: 25362485
  22. Regulation of flowering in rice: two florigen genes, a complex gene network, and natural variation.
    Curr Opin Plant Biol. 2011 Feb;14(1):45-52 PMID: 20864385
  23. Spatially distinct regulatory roles for gibberellins in the promotion of flowering of Arabidopsis under long photoperiods.
    Development. 2012 Jun;139(12):2198-209 PMID: 22573618
  24. Auxin, cytokinin and the control of shoot branching.
    Ann Bot. 2011 May;107(7):1203-12 PMID: 21504914
  25. Genetic interactions in the control of flowering time and reproductive structure development in tomato (Solanum lycopersicum).
    New Phytol. 2006;170(4):701-10 PMID: 16684232
  26. A MYB-domain protein EFM mediates flowering responses to environmental cues in Arabidopsis.
    Dev Cell. 2014 Aug 25;30(4):437-48 PMID: 25132385
  27. The SELF-PRUNING gene of tomato regulates vegetative to reproductive switching of sympodial meristems and is the ortholog of CEN and TFL1.
    Development. 1998 Jun;125(11):1979-89 PMID: 9570763
  28. Tomato yield heterosis is triggered by a dosage sensitivity of the florigen pathway that fine-tunes shoot architecture.
    PLoS Genet. 2013;9(12):e1004043 PMID: 24385931
  29. Multiple bHLH proteins form heterodimers to mediate CRY2-dependent regulation of flowering-time in Arabidopsis.
    PLoS Genet. 2013;9(10):e1003861 PMID: 24130508
  30. Shoot branching and leaf dissection in tomato are regulated by homologous gene modules.
    Plant Cell. 2011 Oct;23(10):3595-609 PMID: 22039213
  31. Arabidopsis MRG domain proteins bridge two histone modifications to elevate expression of flowering genes.
    Nucleic Acids Res. 2014;42(17):10960-74 PMID: 25183522
  32. An antagonistic pair of FT homologs mediates the control of flowering time in sugar beet.
    Science. 2010 Dec 3;330(6009):1397-400 PMID: 21127254
  33. CaBLIND regulates axillary meristem initiation and transition to flowering in pepper.
    Planta. 2011 Dec;234(6):1227-36 PMID: 21773792
  34. Universal florigenic signals triggered by FT homologues regulate growth and flowering cycles in perennial day-neutral tomato.
    J Exp Bot. 2006;57(13):3405-14 PMID: 17005925
  35. Transcription factor PIF4 controls the thermosensory activation of flowering.
    Nature. 2012 Mar 21;484(7393):242-5 PMID: 22437497
  36. The TIR1 protein of Arabidopsis functions in auxin response and is related to human SKP2 and yeast grr1p.
    Genes Dev. 1998 Jan 15;12(2):198-207 PMID: 9436980
  37. Integration of plant responses to environmentally activated phytohormonal signals.
    Science. 2006 Jan 6;311(5757):91-4 PMID: 16400150
  38. Flowering response of the uniflora:blind:self-pruning and jointless:uniflora:self-pruning tomato (Solanum lycopersicum) triple mutants.
    Physiol Plant. 2011 Feb;141(2):166-76 PMID: 21044084
  39. FKF1 conveys timing information for CONSTANS stabilization in photoperiodic flowering.
    Science. 2012 May 25;336(6084):1045-9 PMID: 22628657
  40. Integration of spatial and temporal information during floral induction in Arabidopsis.
    Science. 2005 Aug 12;309(5737):1056-9 PMID: 16099980
  41. In vitro control of floral transition in tomato (Lycopersicon esculentum Mill.), the model for autonomously flowering plants, using the late flowering uniflora mutant.
    J Exp Bot. 2001 Apr;52(357):715-23 PMID: 11413208
  42. A ROP GTPase-dependent auxin signaling pathway regulates the subcellular distribution of PIN2 in Arabidopsis roots.
    Curr Biol. 2012 Jul 24;22(14):1319-25 PMID: 22683260
  43. FLOWERING LOCUS T regulates stomatal opening.
    Curr Biol. 2011 Jul 26;21(14):1232-8 PMID: 21737277
  44. The tomato FT ortholog triggers systemic signals that regulate growth and flowering and substitute for diverse environmental stimuli.
    Proc Natl Acad Sci U S A. 2006 Apr 18;103(16):6398-403 PMID: 16606827
  45. Flowering time regulation in crops—what did we learn from Arabidopsis?
    Curr Opin Biotechnol. 2015 Apr;32:121-9 PMID: 25553537
  46. ABSCISIC ACID-INSENSITIVE 4 negatively regulates flowering through directly promoting Arabidopsis FLOWERING LOCUS C transcription.
    J Exp Bot. 2016 Jan;67(1):195-205 PMID: 26507894
  47. A new CULLIN 1 mutant has altered responses to hormones and light in Arabidopsis.
    Plant Physiol. 2007 Feb;143(2):684-96 PMID: 17158585
  48. Shaping plant architecture.
    Front Plant Sci. 2015 Apr 09;6:233 PMID: 25914710
  49. Multiple pathways regulate shoot branching.
    Front Plant Sci. 2015 Jan 13;5:741 PMID: 25628627
  50. Repression of flowering by the miR172 target SMZ.
    PLoS Biol. 2009 Jul;7(7):e1000148 PMID: 19582143
  51. Multiple loci and genetic interactions involving flowering time genes regulate stem branching among natural variants of Arabidopsis.
    New Phytol. 2013 Aug;199(3):843-57 PMID: 23668187
  52. Ethylene and ABA interactions in the regulation of flower induction in Pharbitis nil.
    J Plant Physiol. 2008 Dec;165(18):1917-28 PMID: 18565620
  53. The flowering hormone florigen functions as a general systemic regulator of growth and termination.
    Proc Natl Acad Sci U S A. 2009 May 19;106(20):8392-7 PMID: 19416824
  54. Photoexcited CRY2 interacts with CIB1 to regulate transcription and floral initiation in Arabidopsis.
    Science. 2008 Dec 5;322(5907):1535-9 PMID: 18988809
  55. SHORT VEGETATIVE PHASE Up-Regulates TEMPRANILLO2 Floral Repressor at Low Ambient Temperatures.
    Plant Physiol. 2015 Oct;169(2):1214-24 PMID: 26243615
  56. SINGLE FLOWER TRUSS regulates the transition and maintenance of flowering in tomato.
    Planta. 2004 Jan;218(3):427-34 PMID: 14504922
  57. Control of flowering and storage organ formation in potato by FLOWERING LOCUS T.
    Nature. 2011 Sep 25;478(7367):119-22 PMID: 21947007
Article Info
Journal
Plant biotechnology journal
Abbr.
Plant Biotechnol J
ISSN
1467-7652
Published
2016-00-00
Epub
2016-00-29
Pages
2310-2321
Language
English
Region
England
NLM ID
101201889
PMCID
PMC5103233
Subset
IM
Databases
GENBANK
GSE45243
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